DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17233 and ccdc82

DIOPT Version :9

Sequence 1:NP_730500.1 Gene:CG17233 / 40220 FlyBaseID:FBgn0036958 Length:1465 Species:Drosophila melanogaster
Sequence 2:XP_004912152.2 Gene:ccdc82 / 100145117 XenbaseID:XB-GENE-1003213 Length:464 Species:Xenopus tropicalis


Alignment Length:548 Identity:95/548 - (17%)
Similarity:210/548 - (38%) Gaps:162/548 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   946 SSVIQQP-GDQTSFRPYAQQQQQAQQQQQQSMSGQHFVQQHCAQLTAGAGQDPLSVPPRREQCSR 1009
            :|:.|.| .|:...  .::::.:..::::.:...:..|.:...|:|       :|.....|:|.:
 Frog    33 NSICQDPYSDEDDL--CSEEESEGSEEEESNSEAEDCVDKEQQQVT-------VSNDDAEEECVK 88

  Fly  1010 KAKQSSMHAMLMNSSSVVGDGGVVGEPDEFTDSDTDPVWTPQEEDSDDGKGYGKRKL-------A 1067
            ::::....|::.:|             |..:||| .||          .|.|.||:.       .
 Frog    89 QSRRRRKSAVMESS-------------DSSSDSD-GPV----------RKVYAKRRCPIDDDDEV 129

  Fly  1068 RRSKGTPRKNTYDHSSGLQQQPQQQQ-----QHHQQLQQMQ--VNQQHHQQQQQVQQMA-GGEST 1124
            |..|..|...|...::.::.:.:.:.     :..::|:.:|  ..::..:.:.:||..: ..||.
 Frog   130 REGKNYPGIKTEAETTEIKVEAENETDVEILKKRKKLENLQKLAEKRKSKSRVRVQDYSEDDESD 194

  Fly  1125 YNSQQNMSGVADVGYASASSGPAANSENFKTGDFIVLRSDLVNDWPTIWQVDSKCILQKYEPFRQ 1189
            .::..::...:|:            .::.:  |||....|..:|                |....
 Frog   195 LDTPLSLEETSDI------------EDSLE--DFIDDDDDDDDD----------------EGDTD 229

  Fly  1190 NGKTFYRNMSKYASWNLETKKLYLKAPVRIQL------HSHTETIVEFMRSELLADDTEQFIEKI 1248
            .|.:..:.::.:       :.|:||.  ||.|      ::|.:.:|   .:.|:...|..|::.:
 Frog   230 EGISEGKQLAHH-------QDLFLKH--RIPLLSDSNHYTHLQRVV---NAFLINITTPDFLQTL 282

  Fly  1249 MEDYLSYRDNFEIYIQTMISQALDPSFFSEITREKDDYFLGSVRVVDNIMENCKRKLLAITPWTR 1313
            .|.....:     |.:.|::..               |.|.. |::...::|...:    :.|::
 Frog   283 YEGIRKKK-----YAKDMLNSL---------------YCLDE-RMIQPRLDNLSTR----SRWSK 322

  Fly  1314 STISSIETWPKCHVFSEWEQNNLTQKNCAGCHQPGIAVRF-----LLFGEPYNPNTMQTIPVDPR 1373
            .....|:.:|:..|...:..:    ::|..|.    ..||     :|.|:.||..||:   ||..
 Frog   323 RYRERIDCYPELQVRRGYGDD----RSCQACE----LNRFCKYTVVLSGQAYNNKTMK---VDDF 376

  Fly  1374 IVYEKDIV-LCRICAARADLFHKIAHEKFNLFINCSQRVTEQQQQFPGKTSTEILNDLLAEHNWI 1437
            :..:|.:: :.||||.|.|.:|::.|.|::|:..|...:                 |.:.|:|.:
 Frog   377 LPNDKQVLKVGRICANRTDAYHQLKHFKYHLYQLCIPAI-----------------DAITEYNSV 424

  Fly  1438 DELFRNMRNCWAEVES---LERQKRFRE 1462
            .|   .:..|.:.:|.   :::|..|.|
 Frog   425 KE---RVELCLSNMEKDGIIKKQADFLE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17233NP_730500.1 DUF4211 1234..1372 CDD:290637 25/142 (18%)
ccdc82XP_004912152.2 DUF4196 <69..126 CDD:372754 17/87 (20%)
DUF4211 233..371 CDD:404759 30/182 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007253
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14689
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8530
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.130

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