Protein Alignment CG13813 and nhr-246

DIOPT Version :10

• Sequence 1: NP_649195.1
• Gene: CG13813 / 40218
• FlyBaseID: FBgn0036956
• Length: 430
• Species: Drosophila melanogaster
• Sequence 2: NP_001256661.1
• Gene: nhr-246 / 191499
• WormBaseID: WBGene00014192
• Length: 386
• Species: Caenorhabditis elegans
• Alignment Length: 323
• Identity: 73/323 - (22%)
• Similarity: 135/323 - (41%)
• Gaps: 53/323 - (16%)

  Fly    55 VVVKMAPRN-------EARRSHMHVVDYYAREVFMYQ---KVFPVFRALSPD----RNTFTVAPA 105
            ||:|: |:|       |.....:..||:...|.||:.   ..:.:|.:||..    ..|:..:.|
 Worm    63 VVLKI-PQNTKGCSVVENAGGGVKNVDHSVVERFMHNTECNYYKLFSSLSEKPLQIPTTYLASKA 126

  Fly   106 LQANDLKAPDEFLIFEDLSESGFRPNSRCIMPTY--DIVVCSLKALAELHACSFILQQTDPLQFK 168
            .:    |||...::.|.|.:.....    ::|.:  |.:...:..|.:||..|...:     ::|
 Worm   127 GE----KAPVPVIVLEMLEDCKLHD----LIPGFNEDQLFKIVDELVKLHIFSLTTE-----KWK 178

  Fly   169 QLVEFVEKDNLFTSD-IEEVTIEFGK--AQLRKARIILKESDGDQVAAVQEVLQLCENQLKSLAL 230
            ::|.  ::..|..|. ::.:..:.|:  ||..:..:||        :.|:..|....|.|:.:..
 Worm   179 EIVP--DESKLAMSGFLQCMVADVGRKLAQNPELGVIL--------SYVENTLDTDPNYLQKMRD 233

  Fly   231 YCVDGKAQAPHAVICHGDFWNNNILYRHEPNSDQPVEAKLIDFQMSRYAPPVLDIVHYLFACTEK 295
            ..::  .:.| :||||||.|...||:..|.|.     |.::|:|.:....|:.|:.|.|..||..
 Worm   234 EYIN--EERP-SVICHGDLWAPQILWDKEDNI-----AGIVDWQATHRGSPMEDLHHILSTCTSV 290

  Fly   296 RLRDEHFPDFMDAYYNTMDQKLKSCNLSLEGIYPRSVFNRQLQQYGVYGLIMGAFSLPFFISN 358
            :.|.......:|.|||.:...||  ....:..:.|...:.:.....:||.....|:..|:.::
 Worm   291 QNRKTFTKPLLDHYYNKLKVGLK--EKGFKTTWTREEIDIEYNYSFIYGASRTIFANGFWANS 351

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG13813	NP_649195.1	EcKL	34..321	CDD:397213	68/284 (24%)
nhr-246	NP_001256661.1	CHK	134..314	CDD:214734	49/208 (24%)