DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-3 and CG7737

DIOPT Version :9

Sequence 1:NP_649194.1 Gene:Su(var)3-3 / 40217 FlyBaseID:FBgn0260397 Length:890 Species:Drosophila melanogaster
Sequence 2:NP_001286308.1 Gene:CG7737 / 36174 FlyBaseID:FBgn0033584 Length:543 Species:Drosophila melanogaster


Alignment Length:602 Identity:148/602 - (24%)
Similarity:241/602 - (40%) Gaps:155/602 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 KVIVIGAGISGLAVAHQLQQFG-MDVIVLEARDRVGGRISTFRKNSYIADVGAMVVTGVYGNPMT 329
            |::|||||.||:|.|.:|.:.| .:|:|:||.||:||||.|......:.|:||....|...|.:.
  Fly    45 KIVVIGAGASGVACATKLLELGFQNVLVVEAEDRLGGRIHTIPFADNVIDLGAQWCHGERDNIVY 109

  Fly   330 ILSKQIGMDLVPIQQTCPLYGPDGKPVPKEKDDVIEREFNRLLESA---SYLSHRLDFNYAGDCP 391
            .|:::...:|  ::.|.|:|  :.....:...||:..|.:..|::.   |.::.:|:..:   |.
  Fly   110 ELTRKQDEEL--LESTGPVY--ENYECVRSNGDVVPEEVSSRLKAIVGDSLVTRQLELRH---CS 167

  Fly   392 VSLGDALEWIISMQEMQVMHKRGQHMQEIIATQTKIIEQRRRLKTLRDTIGKLKNEHLAMINQRK 456
            .|||..|                                   .....||:             |:
  Fly   168 GSLGSYL-----------------------------------TNKFYDTL-------------RR 184

  Fly   457 PKGTDGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEKQMLAKLHELEQNRPSDVYLSSRDRLI 521
            |:.:|.|.:.. .||.: |.| |.|.::.....|.....:......|.|    .|:.|:.:|:  
  Fly   185 PENSDIDAEVA-SEFFV-NYQ-KFENSVEASDTLEQVSGRGYLDYWECE----GDILLNWKDK-- 240

  Fly   522 LDWHFANLEFANATRLNNLSLKHWDQDDDFEFIGHHTTVRNGYSCVPVALTENLDIRVNSAVKE- 585
                                                     ||..:...|..:.::.|...|.| 
  Fly   241 -----------------------------------------GYVELLRLLMRSRELNVEHGVLEQ 264

  Fly   586 -IKYGTKGVEV------VAENLKTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPP 643
             :..||:.|::      ....|:.||.: |..||.||.|::|||||         ..:...|:|.
  Fly   265 RLLLGTRVVKINWNRNDGRVELQMSNGE-TCIADHVVVTVSLGVLK---------DQHLRLFEPQ 319

  Fly   644 LPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFGHV----------GSTTASRGEMFLFWSI 698
            ||..||:||..|.||.:||:.:.|...||..:...|..:          |::.|...::|.|:.:
  Fly   320 LPVEKQRAIDGLAFGTVNKIFVEFPEAFWPEDWTGFTMLWRDEDLDDIRGTSRAWLEDVFGFYRV 384

  Fly   699 SSSPVLLA-LVAGMAANLVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVTRWRSDPWARGSY 762
            |..|.:|| .:...:...:|::..|.:....|.:.:. |....:|.|.....:.|.::...||||
  Fly   385 SYQPRILAGWITNESGRHMETLPVDEVQAGVMYLFRR-FLRWKIPDPANFRTSAWYTNDNFRGSY 448

  Fly   763 SYVSV-------GSSGSDYDLLAAPVIPPSSKDAE---------GLPRLFFAGEHTIRNYPATVH 811
            ||.|:       |:....:.|......|...||:|         ..|.:.||||.:..:|.:|||
  Fly   449 SYRSMDTEQLGTGARELSHPLTVVATTPEKDKDSEDEAWQQSRCDRPIVQFAGEASSEHYYSTVH 513

  Fly   812 GAYLSGLREAGRIADYY 828
            ||..:|.|||.|:|.:|
  Fly   514 GAVEAGWREARRLAQFY 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-3NP_649194.1 SWIRM 165..250 CDD:282311
NAD_binding_8 269..327 CDD:290186 26/58 (45%)
Amino_oxidase 274..824 CDD:279874 139/588 (24%)
CG7737NP_001286308.1 NAD_binding_8 48..106 CDD:290186 26/57 (46%)
Amino_oxidase 54..526 CDD:279874 139/587 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452798
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46708
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10742
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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