Protein Alignment Su(var)3-3 and 4930438A08Rikl

DIOPT Version :10

• Sequence 1: NP_649194.1
• Gene: Su(var)3-3 / 40217
• FlyBaseID: FBgn0260397
• Length: 890
• Species: Drosophila melanogaster
• Sequence 2: XP_006246474.1
• Gene: 4930438A08Rikl / 287305
• RGDID: 1308564
• Length: 536
• Species: Rattus norvegicus
• Alignment Length: 627
• Identity: 143/627 - (22%)
• Similarity: 232/627 - (37%)
• Gaps: 209/627 - (33%)

  Fly   253 FKRLKPIPAKKLG------KVIVIGAGISGLAVAHQLQQFGMDVIVLEARDRVGGRISTFR---K 308
            ::.|..:....||      :|:|||||::||..|..||..|..|.||||..||||||.|.|   .
  Rat    44 YEELLQLARNGLGQTAERKQVVVIGAGMAGLTAAKILQDAGHQVTVLEASGRVGGRIETHRVPGA 108

  Fly   309 NSYIADVGAMVVTGVYGNPMT-----ILSKQIGMDLVPIQQTCPLYGPDGKPV--PKEKDDVIER 366
            :.|| ::|||.:      |:.     .|.|:.|:.|   ::.||........|  .:::...::.
  Rat   109 HWYI-ELGAMRI------PINHRFSHELIKRFGLML---KEFCPCNNQTWVLVNGVRQRSGAVQA 163

  Fly   367 EFNRLLESASYLSHRLDFNYAGDCPVSLGDALEWIISMQEMQVMHKRGQHMQEII-ATQTKIIEQ 430
            :                       |..||    :.:...||      |:..:::. |:..||:|:
  Rat   164 D-----------------------PGLLG----YSVKADEM------GKTAEQLFDASLRKIVEE 195

  Fly   431 RRRLKTLRDTIGKLKNEHLAMINQRKPKGTDGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEK 495
                         |||.....:.::            |..|:.:...||:       .:|.....
  Rat   196 -------------LKNSSCQEVLEK------------YDSFSTKEYLIKV-------GNLSRGAV 228

  Fly   496 QMLAKLHELEQNRPSDVYLSSRDRLILDWHFANLEFANATRLNNLSLKHWDQDDDFEFIGHHTTV 560
            ||:..:    .|..|..|.:..:.|     ...:.|....|.:             |.:|
  Rat   229 QMIGDM----LNTDSGYYEAFTETL-----RGIISFFQEPRFD-------------EIVG----- 266

  Fly   561 RNGYSCVPVALTENL---DIRVNSAVKEIKYGTKGVEVVAENLKTSNSQMTYKADLVVCTLTLGV 622
              |:..:|.||..:|   .:...|..:|::.....|.|..:.......:....||.||...|
  Rat   267 --GFDQLPQALHNSLLPGTVWFYSPAEEVERSGDYVHVTYKTPDPLQPRARLTADFVVVATT--- 326

  Fly   623 LKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTA 687
                     ::.:..::|.|||...||.|::.:.:.:..||:|...:.||:.: .:|.  |.:|.
  Rat   327 ---------AKAARLLRFQPPLSLSKQDALRSVHYNSATKVILACKQRFWERD-GIFS--GKSTT 379

  Fly   688 SRGEMFLFWSISSSP----VLLA----------LVAGMAANLVESVTDDIIIGRCMSVLKNIFGN 738
            .|...|:::.....|    |:||          |.|...:.:|:.|.||      ::.:.|
  Rat   380 DRPSRFIYYPNHIFPNGAGVILASYTLDDDSVFLTALDHSRVVDIVLDD------LAAIHN---- 434

  Fly   739 TSVPQPKE--------TVVTRWRSDPWARGS------YSYVSVGSSGSDY-DLLAAPVIPPSSKD 788
                :|||        :.:..|..||::.|.      |.||       || ..|:.|..|
  Rat   435 ----RPKEELRDLCPYSAIKNWSQDPYSMGGFAFFTPYQYV-------DYAQELSQPEGP----- 483

  Fly   789 AEGLPRLFFAGEHTIRNYPATVHG----AYLSGLREAGRIAD 826
                  :|||||||  :.|   ||    |..||||.|..|.:
  Rat   484 ------VFFAGEHT--DLP---HGWIDTAIKSGLRVARNIQE 514

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Su(var)3-3	NP_649194.1	PLN03000	74..>827	CDD:178578	143/627 (23%)
4930438A08Rikl	XP_006246474.1	NirB	<1..>99	CDD:440863	23/54 (43%)
		YobN	55..512	CDD:440844	141/612 (23%)