DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-3 and PAOX

DIOPT Version :9

Sequence 1:NP_649194.1 Gene:Su(var)3-3 / 40217 FlyBaseID:FBgn0260397 Length:890 Species:Drosophila melanogaster
Sequence 2:NP_690875.1 Gene:PAOX / 196743 HGNCID:20837 Length:511 Species:Homo sapiens


Alignment Length:614 Identity:166/614 - (27%)
Similarity:251/614 - (40%) Gaps:187/614 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 KVIVIGAGISGLAVAHQLQQFGMDVI----VLEARDRVGGRISTFRKNSYIADVGAMVVTG-VYG 325
            :|:|:|.||:||..|.:|  .|....    ||||..|.||||.:.|....:.:|||..:.| ..|
Human    15 RVLVVGGGIAGLGAAQRL--CGHSAFPHLRVLEATARAGGRIRSERCFGGVVEVGAHWIHGPSRG 77

  Fly   326 NPMTILSKQIGMDLVPIQQTCPLYGPDGKPVPKEKDDVIEREFNRLLESASYLS----------- 379
            ||:..|:.:              ||..|:....:::.::|...:..|.|.||.|           
Human    78 NPVFQLAAE--------------YGLLGEKELSQENQLVETGGHVGLPSVSYASSGASVSLQLVA 128

  Fly   380 -----------HRLDFNYAGDCPV-SLGDALEWIISMQEMQVMHKRGQHMQEIIATQTKIIEQRR 432
                       ...:|.:|.:.|| |:|:.|:..|           |||    :|..|: .|:.|
Human   129 EMATLFYGLIDQTREFLHAAETPVPSVGEYLKKEI-----------GQH----VAGWTE-DEETR 177

  Fly   433 RLKTLRDTIGKLKNEHLAMINQRKPKGTDGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEKQM 497
            :||             ||::|               ..||       :|..:|..|         
Human   178 KLK-------------LAVLN---------------SFFN-------LECCVSGTH--------- 198

  Fly   498 LAKLHELEQNRPSDVYLSSRDRLILDWHFANLEFANATRLNNLSLKHWDQDDDFEFIGHHTTVRN 562
                              |.|.:.|      ..|...|.|..|.                .|...
Human   199 ------------------SMDLVAL------APFGEYTVLPGLD----------------CTFSK 223

  Fly   563 GY----SCVPVALTENL--------DIRVNSAVKEIKYGTKGVEVVAENLKTSNSQMTYKADLVV 615
            ||    :|:..||.|:.        .|..|.:.:|..:..:...|..|    ......:.|..|:
Human   224 GYQGLTNCMMAALPEDTVVFEKPVKTIHWNGSFQEAAFPGETFPVSVE----CEDGDRFPAHHVI 284

  Fly   616 CTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFG 680
            .|:.||.|:   .|.::      .||||||..|.:||:::|||..||:.|.|:..||:|:..|..
Human   285 VTVPLGFLR---EHLDT------FFDPPLPAEKAEAIRKIGFGTNNKIFLEFEEPFWEPDCQLIQ 340

  Fly   681 HVGSTTA----SRGEMFLFW-----------SISSSPVLLALVAGMAANLVESVTDDIIIGRCMS 730
            .|...|:    :..|:...|           :.:|..||...:||:.:..:|:::|:.::.....
Human   341 LVWEDTSPLEDAAPELQDAWFRKLIGFVVLPAFASVHVLCGFIAGLESEFMETLSDEEVLLCLTQ 405

  Fly   731 VLKNIFGNTSVPQPKETVVTRWRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEGLPRL 795
            ||:.:.||..:|.||..:.:||.|.|:.|||||||:|||:|.|.||||.| :|.....|:  .::
Human   406 VLRRVTGNPRLPAPKSVLRSRWHSAPYTRGSYSYVAVGSTGGDLDLLAQP-LPADGAGAQ--LQI 467

  Fly   796 FFAGEHTIRNYPATVHGAYLSGLREAGRI 824
            .||||.|.|.:.:|.|||.|||.|||.|:
Human   468 LFAGEATHRTFYSTTHGALLSGWREADRL 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-3NP_649194.1 SWIRM 165..250 CDD:282311
NAD_binding_8 269..327 CDD:290186 24/62 (39%)
Amino_oxidase 274..824 CDD:279874 161/604 (27%)
PAOXNP_690875.1 PLN02568 14..497 CDD:215308 166/614 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2622
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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