Protein Alignment Su(var)3-3 and amx-3

DIOPT Version :10

• Sequence 1: NP_649194.1
• Gene: Su(var)3-3 / 40217
• FlyBaseID: FBgn0260397
• Length: 890
• Species: Drosophila melanogaster
• Sequence 2: NP_001355373.1
• Gene: amx-3 / 184919
• WormBaseID: WBGene00000139
• Length: 450
• Species: Caenorhabditis elegans
• Alignment Length: 581
• Identity: 138/581 - (23%)
• Similarity: 226/581 - (38%)
• Gaps: 156/581 - (26%)

  Fly   266 KVIVIGAGISGLAVAHQLQQFGMDVIVLEARDRVGGRISTFRKNSYIADVGAMVVTGVYGNPMTI 330
            ||.:||||::||..|...:|.|:|..:.|..:|:|||:..|.........||..|.||......:
 Worm     3 KVCIIGAGLAGLRSAIHFEQVGIDYTIFEGSNRIGGRVYPFEYQDGYLHFGAEYVNGVDNEVYNL 67

  Fly   331 LSKQIGMDLVPIQQTCPLYGPDGKPVPKEKDDVIEREFNRLLESASYLSHRLDFNYAGDCPVSLG 395
            :.|               |....|..|: .||:
 Worm    68 VEK---------------YDLFDKTKPR-TDDL-------------------------------- 84

  Fly   396 DALEWIISMQEMQVMHKRGQHMQEIIATQTKIIEQRRRLKTLRDTIGKLKNEHLAMINQRKPKGT 460
                |::. |:..:....| |:     ...||:::              .|:::..:|
 Worm    85 ----WMLD-QDNSITLVNG-HL-----VPKKILDK--------------FNDYIRYLN------- 117

  Fly   461 DGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEKQMLAKLHELEQNRPSDVYLS----SRDRLI 521
                 ....|.:|:..|:.:|..|:         .|.:..|.::.:| ..::|.|    .::...
 Worm   118 -----VALYEKSIKINQLSVENEIN---------NQFIEFLRDVPEN-DHEIYESLINVYKNYFQ 167

  Fly   522 LDWHFANLEFANATRLNNLSLKHWD---QDDDFEFI---GHHTTVRNGYSCVPVALTENLDIRVN 580
            .:|.....|.:    |:|||:  ||   :::|...:   |.:..:::..|.:|..     :||:|
 Worm   168 TEWSSPVGELS----LSNLSI--WDDGTEEEDSAVLNKQGFYEILKDFRSKIPAG-----NIRLN 221

  Fly   581 SAVKEIKYGTKGVEVVAENLKTS--NSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPP 643
            ..|..:|        ..||:..:  |.::.: .|..:.|.:||.||         :.:...|.|.
 Worm   222 CEVINVK--------EEENIMVTLKNGEVLH-FDACIVTCSLGYLK---------KHHKTLFTPQ 268

  Fly   644 LPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTASRGEMFLFWSISS--SPVLLA 706
            |...||.||.|:||||..||.|.:...:|    |....:...|....|.|:.:..||  ..:||.
 Worm   269 LTSVKQDAINRMGFGNNLKVFLEYSDSWW----NSLNTILILTHGENEDFMVFQPSSWAENILLC 329

  Fly   707 LVAGMAANLVESVTD---DIIIGRCM-SVLKNIFGNTSVPQPKETVVTRWRSDPWARGSYSYVSV 767
            .:||.....:...||   .|::...: ..|||..   .|....:.....|.:|.:..|||||::.
 Worm   330 WIAGSGPKKICDKTDFELKILLDTHLHDQLKNYL---DVKASVKIYRKNWINDEFTLGSYSYLTP 391

  Fly   768 GS-SGSDYDLLAAPVIPPSSKDAEGLPRLFFAGEHTIRNYPATVHGAYLSGLREAGRIADY 827
            |. .|.|..:||.||:..::      |.:.||||||......|..||..||||||.||:::
 Worm   392 GQIVGEDICILAQPVLKDNN------PVICFAGEHTDSTMYQTTVGAVRSGLREASRISEH 446

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Su(var)3-3	NP_649194.1	PLN03000	74..>827	CDD:178578	138/579 (24%)
amx-3	NP_001355373.1	Amino_oxidase	11..443	CDD:396255	130/568 (23%)