DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-3 and Maoa

DIOPT Version :9

Sequence 1:NP_649194.1 Gene:Su(var)3-3 / 40217 FlyBaseID:FBgn0260397 Length:890 Species:Drosophila melanogaster
Sequence 2:NP_776101.3 Gene:Maoa / 17161 MGIID:96915 Length:526 Species:Mus musculus


Alignment Length:653 Identity:133/653 - (20%)
Similarity:225/653 - (34%) Gaps:189/653 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 KPIPAKKLGKVIVIGAGISGLAVAHQLQQFGMDVIVLEARDRVGGRISTFRKNSYI--ADVGAMV 319
            ||.....:..|:|||.||||||.|..|.::.::|:|||||||||||..|.| |.::  .|||...
Mouse     6 KPSITGHMFDVVVIGGGISGLAAAKLLSEYKINVLVLEARDRVGGRTYTVR-NEHVKWVDVGGAY 69

  Fly   320 VTGVYGNPMTILSKQIGMDLVPIQ-----------QTCPLYGPDGKPVPKEKDDVIEREFNRLLE 373
            | |...|.:..|||::|::...:.           :|.|..|    ..|...:.:...::|.|..
Mouse    70 V-GPTQNRILRLSKELGIETYKVNVNERLVQYVKGKTYPFRG----AFPPVWNPLAYLDYNNLWR 129

  Fly   374 SASYLSHRLDFNYAGDCPVSLGDALEWIISMQEMQVMHKRGQHMQEIIATQTKIIEQRRRLKTLR 438
            :...:...:..    |.|.....|.||                        .||        |::
Mouse   130 TMDDMGKEIPV----DAPWQARHAEEW------------------------DKI--------TMK 158

  Fly   439 DTIGKLKNEHLAMINQRKPKGTDGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEKQMLAKLHE 503
            |.|.|:             ..|....::.|...||..|        |..|::.|           
Mouse   159 DLIDKI-------------CWTKTAREFAYLFVNINVT--------SEPHEVSA----------- 191

  Fly   504 LEQNRPSDVYLSSRDRLILDWHFANLEFANATRLNNLSLKHWDQDDDFEFIGHHTTVRNGYSCVP 568
                            |...|:..  :....:|:  .|:.:..|:.  :|:|....:...   :.
Mouse   192 ----------------LWFLWYVR--QCGGTSRI--FSVTNGGQER--KFVGGSGQISEQ---IM 231

  Fly   569 VALTENLDIRVNSAVKEIKYGTKGVEVVAENLKTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQ 633
            |.|.:.  ::::|.|..|.....  .::.|.|...:.:..|....:...||.             
Mouse   232 VLLGDK--VKLSSPVTYIDQTDD--NIIIETLNHEHYECKYVISAIPPVLTA------------- 279

  Fly   634 QSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFW------------DPNANLFGHVGSTT 686
               .:.|.|.||..:.|.|:||..|.:.|.::.:...||            |..|.:...:..|.
Mouse   280 ---KIHFKPELPPERNQLIQRLPMGAVIKCMVYYKEAFWKKKDYCGCMIIEDEEAPISITLDDTK 341

  Fly   687 ASRGEMFLFWSISSSPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVTR 751
            ..          .|.|.::..:....|..:..:..||...:...:...:.|:.....|.......
Mouse   342 PD----------GSMPAIMGFILARKAERLAKLHKDIRKRKICELYAKVLGSQEALSPVHYEEKN 396

  Fly   752 WRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEG------LPRLFFAGEHTIRNYPATV 810
            |..:.::.|.|:                ...||......|      :.|::|||..|...:...:
Mouse   397 WCEEQYSGGCYT----------------AYFPPGIMTLYGRVIRQPVGRIYFAGTETATQWSGYM 445

  Fly   811 HGAYLSGLREA-------GRIA--DYYLGYPEG--TPP-DIGYSVAEAANLVSVGNVVKLRDLSP 863
            .||..:|.|.|       |::|  |.::..||.  .|. :|.::..| .||.||..::|:...|.
Mouse   446 EGAVEAGERAAREVLNALGKVAKKDIWVQEPESKDVPALEITHTFLE-RNLPSVPGLLKITGFST 509

  Fly   864 NLS 866
            :::
Mouse   510 SVA 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-3NP_649194.1 SWIRM 165..250 CDD:282311
NAD_binding_8 269..327 CDD:290186 31/59 (53%)
Amino_oxidase 274..824 CDD:279874 113/587 (19%)
MaoaNP_776101.3 YobN 15..463 CDD:224152 117/592 (20%)
NAD_binding_8 18..84 CDD:290186 35/67 (52%)
Interaction with membrane phospholipid headgroups. /evidence=ECO:0000250 520..522
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1231
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1034142at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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