DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-3 and Maob

DIOPT Version :9

Sequence 1:NP_649194.1 Gene:Su(var)3-3 / 40217 FlyBaseID:FBgn0260397 Length:890 Species:Drosophila melanogaster
Sequence 2:NP_766366.2 Gene:Maob / 109731 MGIID:96916 Length:520 Species:Mus musculus


Alignment Length:623 Identity:134/623 - (21%)
Similarity:238/623 - (38%) Gaps:149/623 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 VIVIGAGISGLAVAHQLQQFGMDVIVLEARDRVGGRISTFR-KNSYIADVGAMVVTGVYGNPMTI 330
            |||:|.||||:|.|..|...|:.|:|||||||||||..|.| ||....|:|...| |...|.:..
Mouse     7 VIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKNVKYVDLGGSYV-GPTQNRILR 70

  Fly   331 LSKQIGMDLVPIQQTCPLYGPDGKPVPKEKDDVIEREFNRLLESASYLSHRLDFNYAGDCPVSLG 395
            |:|::|::...:.:                   :||..: .::..||.       :.|..| .:.
Mouse    71 LAKELGLETYKVNE-------------------VERLIH-FVKGKSYA-------FRGPFP-PVW 107

  Fly   396 DALEWIISMQEMQVMHKRGQHMQEIIATQTKIIEQRRRLKTLRDTIGKLKNEHLAMINQRKPKGT 460
            :.:.::.:....:.|.:.||.:......:..:.|:...: |:::.:.|:                
Mouse   108 NPITYLDNNNLWRTMDEMGQEIPSDAPWKAPLAEEWDYM-TMKELLDKI---------------- 155

  Fly   461 DGDLKYCYQEFNIRNTQIKMEETIST-FHDLHAEEKQMLAKLHELEQNRPSDVYLSSRDRLILDW 524
                  |:         .|..:.|:| |.:|     .:.|:.||:             ..|...|
Mouse   156 ------CW---------TKSTKQIATLFVNL-----CVTAETHEV-------------SALWFLW 187

  Fly   525 HFANLEFANATRLNNLSLKHWDQDDDFEFIGHHTTVRNGYSCVPVALTENLDIRVNSAVKEIKYG 589
            :..  :....||:  :|..:..|:.  :|||       |...|...:.:.|..||......|...
Mouse   188 YVK--QCGGTTRI--ISTTNGGQER--KFIG-------GSGQVSERIKDILGDRVKLERPVIHID 239

  Fly   590 TKGVEVVAENLKTSNSQMTYKADLVVCTL--TLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAI 652
            ..|..|:   :||.|.:: |:|..|:..:  .||:              .:.:.||||..:.|.|
Mouse   240 QTGENVI---VKTLNHEI-YEAKYVISAIPPALGM--------------KIHYSPPLPMLRNQLI 286

  Fly   653 KRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTASRGEMFLFWSISS-------SPVLLALVAG 710
            .|:..|::.|.::.:...||...    ...|:......|..:.:::..       :.::..::|.
Mouse   287 SRVPLGSVIKCMVYYKEPFWRKK----DFCGTMVIEGEEAPIAYTLDDTKPDGTYAAIMGFILAH 347

  Fly   711 MAANLVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVTRWRSDPWARGSY-SYVSVGSSGSDY 774
            .|..||....::.:...| .:...:..:....||.......|..:.::.|.| :|...|......
Mouse   348 KARKLVRLTKEERLRKLC-ELYAKVLNSQEALQPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYG 411

  Fly   775 DLLAAPVIPPSSKDAEGLPRLFFAGEHTIRNYPATVHGAYLSGLREA-------GRIADYYLGYP 832
            .:|..||           .::||||..|..::...:.||..:|.|.|       |:|.:..:..|
Mouse   412 RVLRQPV-----------GKIFFAGTETASHWSGYMEGAVEAGERAAREILHAIGKIPEDEIWQP 465

  Fly   833 EGTPPDIG----YSVAEAANLVSVGNVVKLRDLSPNLS 866
            |....|:.    .|.....:|.||..::||..|:..||
Mouse   466 EPESLDVPARPITSTFLERHLPSVPGLLKLFGLTTILS 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-3NP_649194.1 SWIRM 165..250 CDD:282311
NAD_binding_8 269..327 CDD:290186 30/58 (52%)
Amino_oxidase 274..824 CDD:279874 116/568 (20%)
MaobNP_766366.2 NAD_binding_8 9..75 CDD:290186 33/66 (50%)
Amino_oxidase 14..451 CDD:279874 115/562 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1231
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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