DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-3 and Il4i1

DIOPT Version :9

Sequence 1:NP_649194.1 Gene:Su(var)3-3 / 40217 FlyBaseID:FBgn0260397 Length:890 Species:Drosophila melanogaster
Sequence 2:XP_006229253.1 Gene:Il4i1 / 100360621 RGDID:1304831 Length:648 Species:Rattus norvegicus


Alignment Length:693 Identity:157/693 - (22%)
Similarity:254/693 - (36%) Gaps:219/693 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 HSFLERHGFINFGIFKRLKPIPAKKLGKVIVIGAGISGLAVAHQLQQFGMDVIVLEARDRVGGRI 303
            |.:.:....:..|:.:..||      .||:|:|||::||..|..|...|..|.:|||.:|:||||
  Rat    47 HDYEQLLKVVTLGLNRTSKP------QKVVVVGAGVAGLVAAKVLSDAGHKVTILEAGNRIGGRI 105

  Fly   304 STFR--KNSYIADVGAMVVTGVYGNPMTILSKQIGMDLVPIQQTCPLYGPDGKPVPKEKDDVIER 366
            .|||  |..:|.::|||.:...: ..:..|.:.:|::|....|.......:.|.| |.::.|:| 
  Rat   106 FTFRDEKTGWIGELGAMRMPSSH-RILHQLCRSLGLNLTQFTQYDENAWTEVKGV-KLRNYVVE- 167

  Fly   367 EFNRLLESASY-LSHRLDFNYAGDCPVSLGDALEWIISMQEMQVMHKRGQHMQEIIATQTKIIEQ 430
               ::.|...| |:||                              :||...::|.        |
  Rat   168 ---KMPEKLGYDLNHR------------------------------ERGHSPEDIY--------Q 191

  Fly   431 RRRLKTLRD--TIGKLK-----NEHLAMINQRKPKGTDGDLKYCYQEFNIRNTQIKMEETISTFH 488
            ....|.::|  .:|..|     :||..             |:|..:|.|:....:::      ..
  Rat   192 MALNKAIKDVKVLGCKKAMNMFSEHTL-------------LEYLLKEGNLSQPAVQL------LG 237

  Fly   489 DLHAEEKQMLAKLHELEQNRPSDVYLSSRDRLILDWHFANLEFANATRLNNLSLKHWDQDDDFEF 553
            |:.::|                              .|..|..|.|.|      .|....|...:
  Rat   238 DVMSKE------------------------------GFFYLSLAEAFR------AHACLSDRLRY 266

  Fly   554 IGHHTTVRNGYSCVPVALTENLD--IRVNSAVKEIKYGTKGVEVVAENLKTSNSQMTYKADLVVC 616
                :.:..|:..:|.||..:|.  :.:|:.|..|..|...|.|.......|:|.....||:|:.
  Rat   267 ----SRIVGGWDLLPRALLSSLSGTVLLNAPVVSISQGRHEVHVHFTTSLQSHSLEVMTADVVLL 327

  Fly   617 TLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFGH 681
            |.:...|:            .:.|.|||...:|:|::.|.:...:||.|.|.|.||.....:.||
  Rat   328 TASGPALQ------------RISFSPPLTRKRQEALRALHYVAASKVFLSFHRPFWHEEHIMGGH 380

  Fly   682 VGSTTASR---------GEMFL---FWSISSSP-----------VLLALVAGMAANLVESVTDDI 723
            ..:...||         |.:.|   .||.:::|           ::|..:|.:...:|..:.|  
  Rat   381 SNTDRPSRLIFYPAPGEGSLLLASYTWSDAAAPFAGLSTEQTLHLVLKDLAALHGPVVYRLWD-- 443

  Fly   724 IIGRCMSVLKNIFGNTSVPQPKETVVTRWRSDPWARGSYSYVS--VGSSGSDYDLLAAPVIPPSS 786
              ||                   .||.||..||:::|.:....  .|....|||.          
  Rat   444 --GR-------------------GVVKRWAEDPYSQGGFVVQPPLFGQGTEDYDW---------- 477

  Fly   787 KDAEGLP--RLFFAGEHTIRNYPATVHG----AYLSGLREAGRIADYYLGYPEGTPPDIGYSVAE 845
                .:|  |::||||||     |..||    |..||||.|.||...| ||.......:.:::||
  Rat   478 ----SVPYGRIYFAGEHT-----ALPHGWVETAVKSGLRAALRINSNY-GYGMVDLETLEHALAE 532

  Fly   846 AANLVSVGNVVKLRDLSPNLSDSSPSSKKSEENSNSNTADSTE 888
            |:            .....|....|..::::|..|.:..|.::
  Rat   533 AS------------FAEQYLEGDQPEEQQAQEEVNPDRQDLSQ 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-3NP_649194.1 SWIRM 165..250 CDD:282311 1/10 (10%)
NAD_binding_8 269..327 CDD:290186 26/59 (44%)
Amino_oxidase 274..824 CDD:279874 134/592 (23%)
Il4i1XP_006229253.1 Amino_oxidase 83..513 CDD:396255 132/586 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1231
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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