DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-3 and LOC100331367

DIOPT Version :9

Sequence 1:NP_649194.1 Gene:Su(var)3-3 / 40217 FlyBaseID:FBgn0260397 Length:890 Species:Drosophila melanogaster
Sequence 2:XP_017207893.2 Gene:LOC100331367 / 100331367 -ID:- Length:360 Species:Danio rerio


Alignment Length:406 Identity:116/406 - (28%)
Similarity:178/406 - (43%) Gaps:86/406 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 SMQEMQVMHKRGQHMQEIIATQTKIIEQRR--RLKTLRDTIGKLKNEHLAMINQRKPKGTDGDLK 465
            |..:|..:..|.:.:||........:::|.  ....:.|.:...:.:        ||:..|..|.
Zfish     5 SSLQMHTLGVRCELLQEGGRVTDSALDKRMDFHFNAVLDAVSDWRKD--------KPQSQDAPLG 61

  Fly   466 YCYQEFNIRNTQIKMEETISTFHDLHAEEKQMLAKLHELEQNRPSDVYLSSRDRLILDWHFANLE 530
            ...||.    .::.::|:...|.:|  |||                         :|.:|.:|||
Zfish    62 EKIQEV----YKVFLQESGLQFTEL--EEK-------------------------VLHFHLSNLE 95

  Fly   531 FANATRLNNLSLKHWDQDDDFEFIGHHTTVRNGYSCVPVALTENLDIRVNSAVKEIKYGTKGVEV 595
            :|..:.|:             :|.|.|..:.:|||.|...|.:.||||:|:||:.:.|..:.|:|
Zfish    96 YACGSTLD-------------QFSGDHALLTDGYSAVLDKLAQGLDIRLNTAVQRVDYSGEAVKV 147

  Fly   596 VAENLKTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNL 660
                  .|:....:.|..|:.|:.|.:|          |.|::.|.|.||:.|.:||..||.|.:
Zfish   148 ------WSSCGSHWTAHKVLVTVPLALL----------QKNSISFTPALPERKLKAIHSLGAGVI 196

  Fly   661 NKVVLCFDRIFWD---PNANLFGHVGSTTASRGEMFLFWSI---SSSPVLLALVAGMAANLVESV 719
            .||.|.|.|.|||   ..|:.||.|......||...:|:.:   ....||:.:|.|.|..|:..:
Zfish   197 EKVALQFSRRFWDSKVQGADYFGRVPPCPEKRGLFSVFYDMRPQGEECVLMTVVTGEALALIRDL 261

  Fly   720 TDDIIIGRCMSVLKNIFGNTSVPQPKETVVTRWRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPP 784
            .|..::..||.||:.:|....||.|....||||.||||:..:||:|..|.||..||::|..|   
Zfish   262 QDSQVVDLCMQVLRELFPEQDVPDPLRHFVTRWSSDPWSHMAYSFVKTGGSGEAYDIMAEDV--- 323

  Fly   785 SSKDAEGLPRLFFAGE 800
                   ..:||||||
Zfish   324 -------QRKLFFAGE 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-3NP_649194.1 SWIRM 165..250 CDD:282311
NAD_binding_8 269..327 CDD:290186
Amino_oxidase 274..824 CDD:279874 116/406 (29%)
LOC100331367XP_017207893.2 Amino_oxidase <82..>332 CDD:332356 99/315 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1034142at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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