DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17147 and CG13312

DIOPT Version :10

Sequence 1:NP_001262099.1 Gene:CG17147 / 40216 FlyBaseID:FBgn0260393 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster


Alignment Length:365 Identity:70/365 - (19%)
Similarity:104/365 - (28%) Gaps:151/365 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GTCDQYIQCYDGNGTVLTCPSNQSFNPSKGSC-VDTLANSNKYCGNRCEGLDGEWVADPTECHKY 108
            |||:   .|...|.  |||.|:....    || ||.|:                 .|.||:|...
  Fly    28 GTCN---VCNTVNN--LTCYSSTQMQ----SCQVDVLS-----------------TATPTDCPSG 66

  Fly   109 FYCMNGVPLAGMCPVGQHFDERSQSCLYGVDSMCVDVNNICELVAENTKFRNEKDCAYYYECDKT 173
            :.|::|..                    ||         :|:  .|::...::.||....:||:|
  Fly    67 YVCVSGSS--------------------GV---------LCQ--PEDSASDSQADCQECNKCDET 100

  Fly   174 GNHASKSCTVTSKKREYFDVES-----GNCVEANKVECTAHSKENVC------------------ 215
            ...|   ||.|.........::     |.|  |:...|..:..: :|                  
  Fly   101 QTFA---CTGTQSFALCLGTDTVQDSVGTC--ASGYVCNINDTQ-ICGLPADGVMPTCSYSDDST 159

  Fly   216 -------TSSTTMTFKSDQA----------------------TCRGYFVCKALYPVADLDPLWT- 250
                   |||||....|..:                      |||.|..|..      :|..|. 
  Fly   160 TTTVSSTTSSTTAAPPSTSSASTYCAAVQSQGKYAVGYNAYTTCRQYIYCTL------VDGSWIG 218

  Fly   251 ---QCPEGYFFDEDRQLCANPTTVVCTHNRCDGRGTMLVTSSSN--------------------- 291
               .||...:||...::|.:.....|:........|....::||                     
  Fly   219 QTYTCPGSMYFDSASEMCVSTMPSTCSTTATTSSTTTAAPTTSNPEAYCQAMQSAGYYPVGTDAS 283

  Fly   292 -NCHNYIRCVDNKEV---TEETCHWDHFFDETVEACSSKI 327
             .||.||.|..|...   ...||....:::.....|.|.:
  Fly   284 TTCHQYIDCFLNGGTWGGNMYTCPGSLYYNSASRTCVSTL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17147NP_001262099.1 ChtBD2 <44..77 CDD:214696 11/32 (34%)
ChtBD2 89..136 CDD:214696 6/46 (13%)
CBM_14 278..332 CDD:426342 13/75 (17%)
CG13312NP_648260.1 None

Return to query results.
Submit another query.