DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17147 and cbd-1

DIOPT Version :10

Sequence 1:NP_001262099.1 Gene:CG17147 / 40216 FlyBaseID:FBgn0260393 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_502145.2 Gene:cbd-1 / 178061 WormBaseID:WBGene00010351 Length:1319 Species:Caenorhabditis elegans


Alignment Length:324 Identity:73/324 - (22%)
Similarity:114/324 - (35%) Gaps:81/324 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EYEELCRLFKNGTKVRKP-GTCDQ-YIQCYDGNGTVLTCPSNQSFNPSKGSCV------------ 77
            |:::.|.:   |:  |.| |.|.: |::|.|.......|...:.|:.....||            
 Worm  1027 EHDQKCTV---GS--RTPVGFCVRTYLECTDAGNVEKLCRIGKLFDSHSNRCVPRIGCGKEAIRD 1086

  Fly    78 ---DTLANS-----NKYCGNRCEGLDGEWVADPTEC-HKYFYCMNGVPLAGMCPVGQHFDERSQS 133
               |.:|.:     .|....||..:|||.|.....| .||..|..|......|...:.|......
 Worm  1087 AIKDMIATTPAPAQPKQFEGRCAHVDGEAVFSIGVCSSKYLRCSYGASKLQQCSEDRVFSNDKLE 1151

  Fly   134 CLYGVD-SMCV--------------DVNNICELVAENTKFRNEKDCAYYYEC--DKTGNHASKSC 181
            |:.... |.|.              |.:..|: ..|:..:|||:||:...:|  .:...|.|...
 Worm  1152 CIVRESVSACTVPKNPSIKKYYTSNDQSAFCD-GKEDGLYRNERDCSAILQCFGGELFEHPSCQS 1215

  Fly   182 TVTSKKREYFDVESGNCVEANKVE-CTAHSKEN-VCTSSTTMTFKSDQATCRGYFVCKALYPVAD 244
            ::.      |:..:|.|....||. |..|.:.| .|  |...:|.:|...|..::.|        
 Worm  1216 SLA------FNQLTGKCDYPQKVSGCENHGQTNGEC--SEHGSFIADANNCEVFYRC-------- 1264

  Fly   245 LDPLWTQ-----CPEGYFFDEDRQLCANPTTVVCTHNRCDGRGTMLVTSSSNNCHNYIRCVDNK 303
               :|.:     ||.|..|:....:|..|:.|    ..|.|:     .|.||:.:......|:|
 Worm  1265 ---VWGRKVVMTCPSGTVFNPLLSVCDWPSAV----PSCSGQ-----ASDSNSSYGSSTYNDDK 1316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17147NP_001262099.1 ChtBD2 <44..77 CDD:214696 8/34 (24%)
ChtBD2 89..136 CDD:214696 14/47 (30%)
CBM_14 278..332 CDD:426342 7/26 (27%)
cbd-1NP_502145.2 ChtBD2 97..141 CDD:214696
ChtBD2 191..237 CDD:214696
CBM_14 692..743 CDD:426342
CBM_14 785..836 CDD:426342
CBM_14 1108..1161 CDD:426342 14/52 (27%)
CBM_14 1182..1235 CDD:426342 15/59 (25%)
CBM_14 1251..1296 CDD:426342 12/59 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.