DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6933 and obst-J

DIOPT Version :10

Sequence 1:NP_730495.1 Gene:CG6933 / 40214 FlyBaseID:FBgn0036952 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_649179.2 Gene:obst-J / 40202 FlyBaseID:FBgn0036940 Length:353 Species:Drosophila melanogaster


Alignment Length:288 Identity:59/288 - (20%)
Similarity:100/288 - (34%) Gaps:55/288 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RICVVAACLLMASQATGYTMDD---LCQQWSGYGYIGNPSNCHAWGYCKNQEVVAWG--TCPNGL 78
            |:.|:...|.:|:......:.|   :|:....:..:.:..:|..:..|...:.:.:.  .||...
  Fly     4 RLLVIWLLLAIATALVKAELTDISAICRISDPWQMLPHKDHCQRFYVCTGDDDMPFQEFNCPAEY 68

  Fly    79 VFNAQ-----AGSCDYANTTVCSTSAVETCSNVKSPMYVANPLNCTEYAYCDGTGQISYGDCGTG 138
            .|:.:     .|:|...:.....|::||   .|:|        :||.|..|...|..:...|..|
  Fly    69 HFSKKLMICVPGACTDESVFCGLTNSVE---RVQS--------DCTRYRQCLEGGSFAVAKCSVG 122

  Fly   139 GVYSASSTKCIWGP----ACPQDTICRFML-SNIFVGDPNQCGNYINCVNGYGTSEKCSSTANPY 198
            ..:..:...|:  |    |..|   |..:| .|..:.:|:.|..|..|.:|.....:|.|  ..|
  Fly   123 NYFDPARRACL--PVAISAAHQ---CSCVLPDNATLANPSDCETYFRCHSGQAELVQCPS--GDY 180

  Fly   199 YNKATGNC--QSTNPCTGEDSNSGNSDQFTVGQTNATACDEEAFKAADPLTVNGESVDYRYVSDG 261
            :::...:|  ..|..|..:             .|......|:|. |.|.....|.    |.....
  Fly   181 FDERVSSCVPDHTGICLEK-------------PTMPPTLTEQAL-AMDECIRTGS----RLAPHS 227

  Fly   262 VTCYGYYYCAAVNATGYWNQCPTGTQFN 289
            ..|..||.||.......  :||.|..|:
  Fly   228 RDCQRYYICAKKRVLEM--RCPRGQYFD 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6933NP_730495.1 ChtBD2 44..90 CDD:214696 7/52 (13%)
obst-JNP_649179.2 ChtBD2 <40..79 CDD:214696 5/38 (13%)
CBM_14 145..192 CDD:426342 11/48 (23%)
CBM_14 216..259 CDD:426342 11/44 (25%)

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