DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6933 and obst-H

DIOPT Version :10

Sequence 1:NP_730495.1 Gene:CG6933 / 40214 FlyBaseID:FBgn0036952 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_001034020.1 Gene:obst-H / 39681 FlyBaseID:FBgn0053983 Length:269 Species:Drosophila melanogaster


Alignment Length:321 Identity:64/321 - (19%)
Similarity:97/321 - (30%) Gaps:110/321 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MRICVVAACLLMASQATGYTMDDLCQQWSGYGYIGNPSNCHAWGYCKNQEVVAWGTCPNGLVFNA 82
            :.:|:|   ||.:|:......|: |.......::.:..:|.::.||:.:|.:. |.|.:|..|::
  Fly     6 IHLCLV---LLWSSRINADHFDE-CDGMDDGAFVQSWESCQSYVYCEGEESLK-GDCEDGEYFDS 65

  Fly    83 QAGSCDYANTTVCSTSAVETCSNVK-----------------SPMYVANPL-------------N 117
            :||:||.|....|....|:..|:.:                 .|..|..|.             |
  Fly    66 EAGTCDIAANVSCFLDEVDEPSDPEPETDEEEEEIPATPRPTEPPIVETPTEVDIINIAPVVRPN 130

  Fly   118 CTEYAYCDGTGQISYGDCGTGGVYSASSTKCIWGPACPQDTICRFMLSNIFVGDPNQCGNYINCV 182
            |   ...|..||:                                    ||:...|.|.||..|.
  Fly   131 C---PISDDPGQV------------------------------------IFMASNNSCTNYYLCY 156

  Fly   183 NGYGTSEKCSSTANPYYNKATGNCQSTN--PCTGEDSNSGNSDQFTVGQTNATACDEEAFKAADP 245
            :|:.....|.:..  |:|..||.|...:  .|..||..|                    .|....
  Fly   157 HGHAMEMHCDNEL--YFNSLTGQCDYPDKVQCAFEDPRS--------------------HKCLPH 199

  Fly   246 LTVNGESVDYRYVSDGVTCYGYYYCAAVNATGYWNQCP--TGTQFNAGKCVSPASFVCTHN 304
            :|        .:......|..:|||.....|  ..|||  .|.......||......|..|
  Fly   200 MT--------EFFPHPDNCNYFYYCIKGFLT--LQQCPFYYGWDIERRSCVQIGVAKCYGN 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6933NP_730495.1 ChtBD2 44..90 CDD:214696 12/45 (27%)
obst-HNP_001034020.1 CBM_14 26..77 CDD:426342 14/51 (27%)
CBM_14 142..184 CDD:426342 13/43 (30%)
ChtBD2 203..240 CDD:214696 9/38 (24%)

Return to query results.
Submit another query.