DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6933 and obst-G

DIOPT Version :10

Sequence 1:NP_730495.1 Gene:CG6933 / 40214 FlyBaseID:FBgn0036952 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster


Alignment Length:234 Identity:53/234 - (22%)
Similarity:80/234 - (34%) Gaps:70/234 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 CGNYINCVNG---YGTSEKCSSTANPYYNKATGNCQSTN--PC-------TGEDSNSGNSDQFTV 227
            |..|..|.:|   .||.||     |..:|..|.:|...:  .|       ..:|::|..||:.. 
  Fly    46 CKGYYVCADGNAVTGTCEK-----NTLFNPLTLHCDDPDNVDCIFDGKDNIVDDTSSSESDEDD- 104

  Fly   228 GQTNATACDEEAFKAADPLTVNG------ESVDYRYV--SDGV------TCYGYYYCAAVNATGY 278
                    |||..|...|:||..      .::|....  .|||      :|..||.|.|...  :
  Fly   105 --------DEEMAKTDPPVTVKATKKPRPTTLDKMCAGKKDGVMLTKNGSCQEYYVCKAKKP--H 159

  Fly   279 WNQCPTGTQFNAGK--CVSPASFVCTHNRCGNVNNPFMADEG-----------------CKNYTI 324
            ...||....|:..:  |:..:...|:.....|..:...|..|                 |..:.:
  Fly   160 LRSCPDKQHFSPTRRICMKASEAKCSGGTRENKESDGPATTGGVCSDEKENSLVAHRSDCGKFML 224

  Fly   325 CSS--GITGSCPTNAPYYDEVNNICTTK--IPDYAICNS 359
            ||:  .:...|||...:     ||.|::  .|..|.|.:
  Fly   225 CSNMMFLVMDCPTGLHF-----NIATSRCDYPKIAKCQT 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6933NP_730495.1 ChtBD2 44..90 CDD:214696
obst-GNP_648529.1 CBM_14 32..83 CDD:426342 12/41 (29%)
CBM_14 132..184 CDD:426342 12/53 (23%)
CBM_14 204..256 CDD:426342 11/56 (20%)
Blue background indicates that the domain is not in the aligned region.

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