DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7017 and R02F2.4

DIOPT Version :10

Sequence 1:NP_649190.1 Gene:CG7017 / 40213 FlyBaseID:FBgn0036951 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_498171.1 Gene:R02F2.4 / 175755 WormBaseID:WBGene00019833 Length:431 Species:Caenorhabditis elegans


Alignment Length:359 Identity:78/359 - (21%)
Similarity:122/359 - (33%) Gaps:96/359 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EDFEYLSVAEMCDLLPQETSFLRPNTCDNWVRCASNYSVLEQGGCAAGLNYNKELGRCILASSSA 86
            ||..|....|.||                |     .::|.|   |......|:..|.....||..
 Worm    57 EDLVYHKNLEFCD----------------W-----RHNVFE---CGEEGEENEFSGDGSGESSGD 97

  Fly    87 AVCPYADSIADKA-----TNLCANETEGAFIVDPSSSDC-RGYILCKSHKQIKANCPNELIFHPV 145
            ....:.||..:.:     .|:|.:..:|.:    ||..| ..||:|.|......:|...||:.|.
 Worm    98 EEITFGDSSGESSGDELLENVCESLKDGVY----SSGTCSSSYIICNSGSPRFLSCSTPLIYDPT 158

  Fly   146 SRSCVYEKQYRCPISQTKKTS-PACRSLPNNTRLADPVHCDQ-YYECVSEVLHSRACPVASAYDA 208
            ::.|    .::..|.:..:.| ..|.|..|.::    ..|.. ::.|...:.|.|.||....::.
 Worm   159 NKKC----SWKGMIDECSQVSGEYCESDGNISK----SECSNVFFSCSEGIAHRRNCPANLVFNP 215

  Fly   209 NLGYC------VDVAEVSCYESAALPEPENTFCLDSATGSARVGYFADDESCSHYYIC--GSPVA 265
            .:..|      :|.:|.|       .:|:|...:|        |||:.....|.:..|  |.|:.
 Worm   216 AISSCDWPKNVMDCSEKS-------EKPQNCGEVD--------GYFSFGRCSSSFSACTNGIPIV 265

  Fly   266 GKHDTEPKHLSCPLGQYFDFEKLSCRDRLNV-RCQLDR---------------CVGTNITYVNVA 314
                     :.||.|..|..:...|....|| .|.|:.               |  ||:.....|
 Worm   266 ---------MFCPDGLMFSEKNQMCDYEWNVDECDLESSGFMENYKASEALTPC--TNMDNGLYA 319

  Fly   315 GDC-QSYGRCSGGVTVSLGQCPTGYYFDERNQGC 347
            .|| .....|..| ..::.:||....|:|.:..|
 Worm   320 LDCTPRVLSCQNG-RENIFECPPSLVFNENSLIC 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7017NP_649190.1 CBM_14 103..155 CDD:426342 14/52 (27%)
ChtBD2 246..290 CDD:214696 11/45 (24%)
CBM_14 303..348 CDD:426342 13/46 (28%)
R02F2.4NP_498171.1 CBM_14 25..74 CDD:426342 7/37 (19%)
ChtBD2 117..165 CDD:214696 15/55 (27%)
CBM_14 185..229 CDD:426342 7/47 (15%)
ChtBD2 240..283 CDD:214696 13/59 (22%)
CBM_14 310..361 CDD:426342 13/46 (28%)

Return to query results.
Submit another query.