DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6996 and Mur89F

DIOPT Version :9

Sequence 1:NP_001262094.1 Gene:CG6996 / 40212 FlyBaseID:FBgn0036950 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_001262662.1 Gene:Mur89F / 42080 FlyBaseID:FBgn0038492 Length:2159 Species:Drosophila melanogaster


Alignment Length:485 Identity:87/485 - (17%)
Similarity:128/485 - (26%) Gaps:213/485 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NATLICSLVVNGTKMNDPRACNAWIQCIDG-----SPVSGSCATGLFYDRESQKCLSSSSIK-C- 81
            |.:..|.  |||..:.|...|..:.:|:|.     :.|..||..|..:|.:.|.|..:.::| | 
  Fly  1200 NPSETCK--VNGQFIGDRSDCAKFYRCVDNDRGGFNMVPFSCGPGTVWDAQMQACNHAWAVKECG 1262

  Fly    82 -----LSSDPCAALPT------------------------------------------------- 92
                 .:|.|..:.||                                                 
  Fly  1263 GIAPPTTSTPTTSRPTTASTSRPSDQTSTSRPTGPPTTARPVTARPTTSSPTTASSSQTTSPVTQ 1327

  Fly    93 -----------GFAADPYSCNGYYYC-KDGKGTHGV------CNTGMNFNSGTQDCIRDF-PCSN 138
                       ||.|||.:|:.:|.| ::.||  |.      |..|..::...|.|..:| .||.
  Fly  1328 APNTDGKCRSEGFMADPNNCSKFYRCVRNNKG--GFTSIPFQCGAGTVWDQDLQTCNHNFNNCST 1390

  Fly   139 KMD---PDSYCNILPDGVFVKDTDNCNGYQLCWDGQVINGTCPGTFYFKASTAQCDYPQNVECDF 200
            ..:   |...|....:|.....|.:..             |.|.|......|:....|.....:.
  Fly  1391 GTESTTPKPPCEPATNGTTATSTSSTT-------------TPPPTTTDLPPTSTTGLPPTTTTEL 1442

  Fly   201 VP-----------------------------VPDISKKGVCPETGGFISDNKT------------ 224
            .|                             :|..:..|..|.|....|:.:|            
  Fly  1443 PPTTTTDLPPTTTTRLPPTTTTSLPPTTTTGLPPTTTTGAQPTTTTLSSETETSTVTTSPESTTQ 1507

  Fly   225 ---------------CNGYYYCKDLGNGEFSLEHGVCSDGRFFLATDGGACVPRSKVKCGYDRCV 274
                           |.|..|..|                            |....|  |.||:
  Fly  1508 PPSTTTMKPLPAGTECTGEGYMAD----------------------------PEDCRK--YYRCI 1542

  Fly   275 GLGNSTIQLANESDDGCRGYSICQDGIVIGQGTCPQDEYFDEITQRCTTQVISYTACQISEATTG 339
            ..|.|           .|.|:.          |||:...::|..|.| ..|.:...|....|...
  Fly  1543 NAGAS-----------YRKYNF----------TCPKGTGWNEEVQTC-DYVENIPRCSKLPAEPI 1585

  Fly   340 SQVPSGT-----TTTTSSTITSTTIAVPVS 364
            :..||..     :||..||...||:..|::
  Fly  1586 TTTPSEESKDPGSTTPQSTDEPTTVTKPIT 1615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6996NP_001262094.1 CBM_14 29..73 CDD:279884 14/48 (29%)
ChtBD2 85..130 CDD:214696 17/111 (15%)
CBM_14 146..196 CDD:279884 8/49 (16%)
CBM_14 273..322 CDD:279884 10/48 (21%)
Mur89FNP_001262662.1 CBM_14 57..106 CDD:279884
CBM_14 200..250 CDD:279884
CBM_14 484..536 CDD:279884
CBM_14 745..798 CDD:279884
CBM_14 1025..1074 CDD:279884
CBM_14 1206..1261 CDD:279884 15/56 (27%)
CBM_14 1336..1388 CDD:279884 16/53 (30%)
CBM_14 1523..1577 CDD:279884 20/105 (19%)
VAD1-2 <1599..>1656 CDD:291956 7/17 (41%)
CBM_14 1809..1861 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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