DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6996 and R02F2.4

DIOPT Version :10

Sequence 1:NP_649189.2 Gene:CG6996 / 40212 FlyBaseID:FBgn0036950 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_498171.1 Gene:R02F2.4 / 175755 WormBaseID:WBGene00019833 Length:431 Species:Caenorhabditis elegans


Alignment Length:325 Identity:79/325 - (24%)
Similarity:129/325 - (39%) Gaps:52/325 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ICSLVVNGTKMNDPRACNAWIQCIDGSPVSGSCATGLFYDRESQKCLSSSSI-KC--LSSDPCAA 89
            :|..:.:|. .:.....:::|.|..|||...||:|.|.||..::||.....| :|  :|.:.|.:
 Worm   118 VCESLKDGV-YSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMIDECSQVSGEYCES 181

  Fly    90 LPTGFAADPYSCNGYYYCKDGKGTHGVCNTGMNFNSGTQDCIRDFP-----CSNKMDPDSYCNIL 149
              .|..:.....|.::.|.:|......|...:.||.....|  |:|     ||.|.:....|..:
 Worm   182 --DGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSC--DWPKNVMDCSEKSEKPQNCGEV 242

  Fly   150 PDGVFVKDTDNC-NGYQLCWDGQVINGTCPGTFYFKASTAQCDYPQNV-ECDFVPVPDISKKGVC 212
             ||.|  ....| :.:..|.:|..|...||....|......|||..|| |||.            
 Worm   243 -DGYF--SFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDL------------ 292

  Fly   213 PETGGFISDNKTCNGYYYCKDLGNGEFSLEHG----VCSDGR--FF-----LATDGGACV---PR 263
             |:.||:.:.|.......|.::.||.::|:..    .|.:||  .|     |..:..:.:   |.
 Worm   293 -ESSGFMENYKASEALTPCTNMDNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPE 356

  Fly   264 SKVKCGYDRCVGLGNSTIQLANESDDG------C-RGYSICQDGIVIGQGTCPQDEYFDEITQRC 321
            :.:||..:..:.:.:::|...:.|.||      | |.|..|.:|.:|.......:..|.....:|
 Worm   357 TSLKCCMEDALLIRDASIGTYDCSIDGLFSSTLCSRNYHKCSNGQLIPHECADSNAVFSASAAKC 421

  Fly   322  321
             Worm   422  421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6996NP_649189.2 CBM_14 29..73 CDD:426342 13/43 (30%)
ChtBD2 85..130 CDD:214696 8/44 (18%)
CBM_14 146..196 CDD:426342 14/50 (28%)
CBM_14 273..322 CDD:426342 12/56 (21%)
R02F2.4NP_498171.1 CBM_14 25..74 CDD:426342
ChtBD2 117..165 CDD:214696 15/47 (32%)
CBM_14 185..229 CDD:426342 9/45 (20%)
ChtBD2 240..283 CDD:214696 11/45 (24%)
CBM_14 310..361 CDD:426342 10/50 (20%)
Blue background indicates that the domain is not in the aligned region.

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