DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7290 and CG4835

DIOPT Version :9

Sequence 1:NP_001262093.1 Gene:CG7290 / 40211 FlyBaseID:FBgn0036949 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster


Alignment Length:506 Identity:114/506 - (22%)
Similarity:180/506 - (35%) Gaps:122/506 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PAIADVNVTALCLLVSNGNYVASQSDCSTYYQCQGSSFTAMSCPQGYYF---------------- 69
            |:..|.|.   |....:|...|...:||.|..|:.:......||....|                
  Fly   385 PSDVDPND---CKDEKDGTIFAYIGNCSEYLICKDNQVQMGHCPPNTLFNPDLLVCDEPDDVVCL 446

  Fly    70 -DKNAQQCTGTVPSTCTSNSDP----------------CLGKAVGSFAASSSSCGGYYYC-GASG 116
             |:.......|:|:|.|..:.|                |.|:.:|:..:....|..||.| |...
  Fly   447 GDRTTTPIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQELGASFSYPDDCSKYYLCLGGGQ 511

  Fly   117 AVRGNCPAGENFNPTTMAC---------------------------VYKNNYPCS-ESAGDGSTV 153
            .....|..|..|:|:|..|                           ..:|..|.| .:..:.:|.
  Fly   512 WTLAPCIYGSYFDPSTGQCGPDVAPDACKPSQVTTTTTTTTTETTTTERNTTPKSTATTTERTTT 576

  Fly   154 SVA--LNLCNLVKNGFYFGSPSDCSGWNFCQDNVLHSGSCEDGLVFNVQASNCGYKM-ASSC--- 212
            :||  ..:|...........|::|:.:..|...:..:..|.||..|:.:...|.... .|.|   
  Fly   577 TVAPKTGICGGRNENENIAYPNNCTKYIVCVSPIPIAFFCPDGTFFSSKLEKCIDDWDESDCEGD 641

  Fly   213 -AQVTNDPSLT-GVSAPTTCSSSGATIAATACN-QYYLCSAGNYQLM--TCPSGYYYDTISKACV 272
             :..|.:|..| ....||.|::|.........| |:::....:|..|  .|..|.|||.|::.|.
  Fly   642 QSTTTLEPGYTRPPPEPTMCTNSSRDTFPYPDNCQWFIRCVDDYIYMMDVCNCGEYYDPITEKCG 706

  Fly   273 TRMEARNDCDRC----VGTTATFVNAYSAT-------------------------NCSDYLYCVN 308
            ..:.:    |.|    ..||:|.....:.|                         :||.|:.|..
  Fly   707 ADVPS----DACRWDYTSTTSTTSEPTTTTAVTRPPPQKGPCDDVEDGALVAYPNDCSKYIQCDR 767

  Fly   309 GVQKAVESCPTNYYFNENLGSCVNGLEPKFLCCN------PTQSDGTSTSSSGSTSSGSTSSGST 367
            .:..|.| |.....|:..||.||   :.....|:      |::|..|.....|||:....|:||:
  Fly   768 PIAVAFE-CEKGDEFSVELGKCV---DASLANCSITTTAKPSESTTTPRDGEGSTTPSEPSTGSS 828

  Fly   368 SSGST-SSGSTSSGSTSSGSTSSGSTSSGSTSSGSTSSGTSSTT--STGTS 415
            :..|| |:...|:.||:..:|.|.:.|:..:|:|.::..|.|:|  ||.||
  Fly   829 TESSTESTTEPSTESTTESTTESTTESTTESSTGQSTETTESSTVLSTDTS 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7290NP_001262093.1 CBM_14 32..77 CDD:279884 11/61 (18%)
CBM_14 91..142 CDD:279884 15/78 (19%)
CBM_14 160..207 CDD:279884 9/46 (20%)
CBM_14 234..277 CDD:279884 11/45 (24%)
ChtBD2 <296..331 CDD:214696 11/59 (19%)
CG4835NP_647965.3 CBM_14 51..103 CDD:279884
CBM_14 185..237 CDD:279884
CBM_14 273..322 CDD:279884
CBM_14 393..444 CDD:279884 10/50 (20%)
CBM_14 485..539 CDD:279884 14/53 (26%)
CBM_14 585..638 CDD:279884 10/52 (19%)
CBM_14 661..714 CDD:279884 14/56 (25%)
CBM_14 744..796 CDD:279884 12/55 (22%)
CBM_14 914..962 CDD:279884
CBM_14 1175..1212 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444100
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.