DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7298 and CG43896

DIOPT Version :9

Sequence 1:NP_649187.3 Gene:CG7298 / 40210 FlyBaseID:FBgn0036948 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster


Alignment Length:447 Identity:102/447 - (22%)
Similarity:161/447 - (36%) Gaps:123/447 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CLMGGQALGD-AILEGNYNVTAVCTAVKVGTQLGSIESCQTYYVCQSTGPVQSSCQSGYSYDYKR 75
            |.|.|::|.. ::|......|.||:....|..:.:..||..:|:|.........|..|..::...
  Fly    73 CTMAGRSLCKLSLLAPLAEATNVCSTEVNGAYIANSGSCGEFYICDEQIAYPQKCDLGSFFNETL 137

  Fly    76 SSCYPSSEVDCYWGVENPCAGK-NNTWVPNTAVCGGWFYCLEGKSA------GS----------- 122
            ::|.|.:...|:   :|.|..| |..:|.|.|.||.::.|..|::.      ||           
  Fly   138 AACIPDANSTCW---QNLCINKTNGVFVENEANCGSYYVCSNGEATLQTCPQGSFFNTSVAACTV 199

  Fly   123 --GN--------------------------------------CPVNQKFDTTTLACVYGTCS--- 144
              ||                                      ||....|::....||.|||:   
  Fly   200 DQGNSQCWVNYCIGQDDGSAVADKSNCSLFYVCSNNTATAQECPEGSYFESNNWGCVPGTCTTES 264

  Fly   145 ----NTQGTNETVLESL--------CDVVPPGQYFGDTESCSTWHYCESTSTGLVLQSGKCSANN 197
                :|..|.|:..|..        |..:....:..|.|:|..:..|...    ||.:..|...|
  Fly   265 PCDDSTTTTTESCAEETTEPPASCDCGDIKNADFIPDEENCRKYFICIDG----VLVAADCGKGN 325

  Fly   198 QTAYNVLANQCTYESASVCSRVTNIPLSDAAVSCSTNGAKSADPKVCGTYYVCTNGKNVATYCPT 262
              .:|...:.|..::.:.|           .|:..|:|....||:.|..|:.|.:|...:..|.:
  Fly   326 --VFNANLSVCEVDADNTC-----------CVADCTDGEAKVDPQDCTKYFKCQSGDWTSVSCDS 377

  Fly   263 GDYYDDSLGYC-VSRQVATPVAGCNRCQYATSTFV--------NAVD----SNNCSTYYYCNSQG 314
            |.|::::|..| |........|..|..|..|::.|        ||.|    ..||.||.:|.| |
  Fly   378 GSYFNETLNCCQVDVNNVCIDAKSNSTQIPTTSTVETSSVDKCNAKDPPASGKNCWTYQHCIS-G 441

  Fly   315 EATLNTCPADTFFDESRQGCKSDDDLSTYVPLNGA-------------CKGATAEGS 358
            :....|||.:|:||.|...|:  :|.....|.|.:             |:|..|:|:
  Fly   442 QWEDGTCPNNTYFDASVGICR--EDTENVCPENRSSGSRQKRSVEDCTCEGGIAQGT 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7298NP_649187.3 ChtBD2 <239..274 CDD:214696 11/35 (31%)
ChtBD2 286..334 CDD:214696 21/59 (36%)
CG43896NP_001261732.1 CBM_14 96..147 CDD:279884 10/50 (20%)
CBM_14 153..206 CDD:279884 14/52 (27%)
CBM_14 211..257 CDD:279884 4/45 (9%)
CBM_14 298..343 CDD:279884 11/61 (18%)
CBM_14 354..395 CDD:279884 12/40 (30%)
CBM_14 427..468 CDD:279884 16/43 (37%)
ChtBD2 488..535 CDD:214696 4/9 (44%)
CBM_14 544..593 CDD:279884
CBM_14 <1320..1361 CDD:279884
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:279884
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:279884
CBM_14 1896..1939 CDD:279884
ChtBD2 2046..2091 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444071
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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