DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7298 and R02F2.4

DIOPT Version :9

Sequence 1:NP_649187.3 Gene:CG7298 / 40210 FlyBaseID:FBgn0036948 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_498171.1 Gene:R02F2.4 / 175755 WormBaseID:WBGene00019833 Length:431 Species:Caenorhabditis elegans


Alignment Length:374 Identity:82/374 - (21%)
Similarity:130/374 - (34%) Gaps:114/374 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GQALGDAILEGNYNVTAVCTAVKVGTQLGSIESC-QTYYVCQSTGPVQSSCQSGYSYDYKRSSCY 79
            |::.||.:||.      ||.::|.|..  |..:| .:|.:|.|..|...||.:...||       
 Worm   107 GESSGDELLEN------VCESLKDGVY--SSGTCSSSYIICNSGSPRFLSCSTPLIYD------- 156

  Fly    80 PSSEVDCYW-GVENPCAGKNNTWVP-----NTAVCGGWFY-CLEGKSAGSGNCPVNQKFDTTTLA 137
            |::: .|.| |:.:.|:..:..:..     :.:.|...|: |.|| .|...|||.|..|:....:
 Worm   157 PTNK-KCSWKGMIDECSQVSGEYCESDGNISKSECSNVFFSCSEG-IAHRRNCPANLVFNPAISS 219

  Fly   138 C--------------------------VYGTCSNTQG--TNETVLESLCDVVPPGQYFGDTESCS 174
            |                          .:|.||::..  ||...:...|   |.|..|.:     
 Worm   220 CDWPKNVMDCSEKSEKPQNCGEVDGYFSFGRCSSSFSACTNGIPIVMFC---PDGLMFSE----- 276

  Fly   175 TWHYCESTSTGLVLQSGKCSANNQTAYNVLANQCTYESASVCSRVTNIPLSDAAVSCST--NGAK 237
                                .|....|....::|..||:..   :.|...|:|...|:.  ||..
 Worm   277 --------------------KNQMCDYEWNVDECDLESSGF---MENYKASEALTPCTNMDNGLY 318

  Fly   238 SAD--PKVCGTYYVCTNGKNVATYCPTG----------DYYDDSLGYCVSRQVATPVAGCNRCQY 290
            :.|  |:|..    |.||:.....||..          ||.:.||..|:...:....|       
 Worm   319 ALDCTPRVLS----CQNGRENIFECPPSLVFNENSLICDYPETSLKCCMEDALLIRDA------- 372

  Fly   291 ATSTFVNAVD----SNNCSTYYYCNSQGEATLNTC-PADTFFDESRQGC 334
            :..|:..::|    |..||..|:..|.|:...:.| .::..|..|...|
 Worm   373 SIGTYDCSIDGLFSSTLCSRNYHKCSNGQLIPHECADSNAVFSASAAKC 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7298NP_649187.3 ChtBD2 <239..274 CDD:214696 12/46 (26%)
ChtBD2 286..334 CDD:214696 11/52 (21%)
R02F2.4NP_498171.1 CBM_14 25..74 CDD:279884
ChtBD2 117..165 CDD:214696 16/63 (25%)
CBM_14 185..229 CDD:279884 12/44 (27%)
ChtBD2 240..283 CDD:214696 10/70 (14%)
CBM_14 310..361 CDD:279884 15/54 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157869
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.