DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7298 and Gm30500

DIOPT Version :9

Sequence 1:NP_649187.3 Gene:CG7298 / 40210 FlyBaseID:FBgn0036948 Length:369 Species:Drosophila melanogaster
Sequence 2:XP_017171830.1 Gene:Gm30500 / 102632425 MGIID:5589659 Length:614 Species:Mus musculus


Alignment Length:356 Identity:75/356 - (21%)
Similarity:106/356 - (29%) Gaps:119/356 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GNYNVTAVCTAVKVGTQLGSIESCQTYYVCQSTGPVQSSCQSG-YSYDYKRSSCYPSSEVDCYWG 89
            |.:.::.|.:....| :.|....|...:.|.....:...|::| |.....:.||:|         
Mouse   154 GYFCLSGVSSPTPTG-RSGHGGPCPQGHFCPRGTSLPQPCRAGSYGSLLGQVSCFP--------- 208

  Fly    90 VENPCAGKNNTWVPNTAVCGGWFYCLEGKSAGSG-NCPVNQKFDTTTLACVYGT-------CSNT 146
                              |...:||.|..::.|| .||..       ..|..||       |...
Mouse   209 ------------------CPAGYYCPENITSYSGYPCPAG-------FYCPRGTKHAAQFPCPRG 248

  Fly   147 QGTNETVLESL--CDVVPPGQYFGD------TESCSTWHYCES-------------TSTGLVLQS 190
            ....:.:..||  |...|||.|.|.      :..|....||.|             |||..:..:
Mouse   249 YYNPDPLTHSLDSCLPCPPGHYCGQENLTKPSGPCDAGWYCVSAAWNARPFDLDNYTSTNCLCPA 313

  Fly   191 ----GKCSANNQTAYNVLANQCTYESASVCSRVTNIPLSDAAVS-CSTNGAKS-ADPKVCGTYYV 249
                |||.|                 .|.|...:..|:.....| |:|:|..: ..|  |...|.
Mouse   314 TATGGKCPA-----------------GSYCPEGSPEPIPCTPGSFCATSGLPTPTGP--CQAGYF 359

  Fly   250 CTNGKN--------VATYCPTGDYYDDSLGYCVSRQVATPVAGCNRCQYATSTFVNAVDS----- 301
            |..|..        ....||.|       .||       |||..........||.:..:.     
Mouse   360 CIGGSESPAPVDEVTGGPCPPG-------SYC-------PVASHKPTPCPVGTFSSLPEQTTSST 410

  Fly   302 -NNCSTYYYCNSQG-EATLNTCPADTFFDES 330
             .:|.:.:||...| :|....|||..:.|.|
Mouse   411 CRSCPSGFYCKEAGLQAPSGWCPAGYYCDSS 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7298NP_649187.3 ChtBD2 <239..274 CDD:214696 9/42 (21%)
ChtBD2 286..334 CDD:214696 12/52 (23%)
Gm30500XP_017171830.1 TNFRSF 394..518 CDD:389949 12/48 (25%)
CRD1 394..411 CDD:276900 2/16 (13%)
CRD2 414..451 CDD:276900 10/28 (36%)
CRD3 453..506 CDD:276900
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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