DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-F and LOC5667990

DIOPT Version :10

Sequence 1:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_001689299.2 Gene:LOC5667990 / 5667990 VectorBaseID:AGAMI1_003631 Length:237 Species:Anopheles gambiae


Alignment Length:310 Identity:55/310 - (17%)
Similarity:79/310 - (25%) Gaps:108/310 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 WELPKVRHTVG-HLSHICLGRQEGDLVPHPLDCNGYFSCSR-VPTLLYCDQGLQFDENRAICDLP 89
            |.:|    ..| ..:.:|.|.:.|... ||.||..|..|.. .|.:|.|..|..|......|...
Mosquito    18 WSVP----AEGVDFNKLCQGVRFGTFA-HPNDCRQYVMCVLWNPVVLSCPGGYVFQPEVQFCVQE 77

  Fly    90 ENTNCRPVATGTVESANGLADNSELNWWPHKPKPVFVAVDVTSGQPVNPMEKYDPEHIECRH--- 151
            ....|                |:|:...|.:........:.|:..|            ||.|   
Mosquito    78 SQYQC----------------NTEVTSGPEETTTTSTTPEPTTSVP------------ECVHRPS 114

  Fly   152 YGAYF--------LPHPRNCGLYFICAYGHLHRHQCGRGTAWNFEKSECQLSDQAICYGESQISE 208
            :.::|        :.:|.||..|..|.........|..||.:|....:|...:...|        
Mosquito   115 WESFFCDNARRALVANPMNCTQYIRCQLQVPANQHCPAGTVFNDLYQDCFPREHETC-------- 171

  Fly   209 PHTDVETTMKVPTANSEGAVTVCYIVGSSEYTTLQQFLTSPEITELPPVTPPSPPRAEANALTCP 273
                                            ||                      |......|.
Mosquito   172 --------------------------------TL----------------------ASVREDFCV 182

  Fly   274 STKQSYMSHPEDCSKYYICIGGMPVLTSCPKGLFWDQKSGFCEMEKNVKC 323
            |......:||..|:::..|:.....|.|||....:......|.....|.|
Mosquito   183 SRADGSYAHPFLCNRFVTCVQQQLRLESCPPFFVFSPTVAHCVKGSAVDC 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-FNP_649186.1 CBM_14 43..91 CDD:426342 15/48 (31%)
CBM_14 156..198 CDD:426342 11/49 (22%)
CBM_14 272..321 CDD:426342 11/48 (23%)
LOC5667990XP_001689299.2 None

Return to query results.
Submit another query.