DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-F and Gasp

DIOPT Version :10

Sequence 1:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster


Alignment Length:293 Identity:66/293 - (22%)
Similarity:91/293 - (31%) Gaps:132/293 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PHPLDCNGYFSCSR-VPTLLYCDQGLQFD--------ENRAICDLPENTNCRPVATGTVESANGL 108
            ||...|:.|:.|.. |..|..|..||.||        ||   ||...|.:|              
  Fly    31 PHDTSCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTEN---CDYLHNVDC-------------- 78

  Fly   109 ADNSELN---WWPHKPKPVFVAVDVTSGQPVNPMEKYDPEHIEC-RHYGAYFLPHPRNCGLYFIC 169
            .|.:||.   ..||                             | |.||.:  |....|.:::.|
  Fly    79 GDRTELEPPITTPH-----------------------------CSRLYGIF--PDENKCDVFWNC 112

  Fly   170 AYGHLHRHQCGRGTAWNFEKSECQLSDQAICYGESQISEPHTDVETTMKVPTANSEGAVTVCYIV 234
            ..|...|:||..|.|::.:...|..:||                     ||...:|         
  Fly   113 WNGEPSRYQCSPGLAYDRDARVCMWADQ---------------------VPECKNE--------- 147

  Fly   235 GSSEYTTLQQFLTSPEITELPPVTPPSPPRAEANALTCPSTKQ-------SYMSHPEDCSKYYIC 292
                           |:               ||..:||:..:       |..:|||||.|||||
  Fly   148 ---------------EV---------------ANGFSCPAAGELANAGSFSRHAHPEDCRKYYIC 182

  Fly   293 IGGMPVLTSCPKGLFW----DQKSGFCEMEKNV 321
            :.|:.....||.|..:    ...:|.||..::|
  Fly   183 LEGVAREYGCPIGTVFKIGDSDGTGNCEDPEDV 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-FNP_649186.1 CBM_14 43..91 CDD:426342 16/46 (35%)
CBM_14 156..198 CDD:426342 11/41 (27%)
CBM_14 272..321 CDD:426342 20/59 (34%)
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 15/43 (35%)
CBM_14 97..144 CDD:426342 16/69 (23%)
CBM_14 170..218 CDD:426342 18/46 (39%)

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