DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-F and obst-G

DIOPT Version :9

Sequence 1:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster


Alignment Length:322 Identity:64/322 - (19%)
Similarity:110/322 - (34%) Gaps:77/322 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ICFQLGAGHAVDQSWELPKVRHTVGHLSHICLGRQEGDLVPHPLDCNGYFSCSRVPTLL-YCDQG 76
            :|..|     |.|...|..|::.....:.:|.|: .|.|:|....|.||:.|:....:. .|::.
  Fly     7 LCVML-----VLQESTLAVVQNGFAFKTSLCEGK-NGGLLPMFGSCKGYYVCADGNAVTGTCEKN 65

  Fly    77 LQFDENRAICDLPENTNC-----RPVATGTVESANGLADNSELNWWPHKPKPVFVAVDVTSGQPV 136
            ..|:.....||.|:|.:|     ..:...|..|.:...|:.|:    .|..|. |.|..|.....
  Fly    66 TLFNPLTLHCDDPDNVDCIFDGKDNIVDDTSSSESDEDDDEEM----AKTDPP-VTVKATKKPRP 125

  Fly   137 NPMEKYDPEHIECR-HYGAYFLPHPRNCGLYFICAYGHLHRHQCGRGTAWNFEKSECQLSDQAIC 200
            ..::|.      |. ......|....:|..|::|.....|...|.....::..:..|..:.:|.|
  Fly   126 TTLDKM------CAGKKDGVMLTKNGSCQEYYVCKAKKPHLRSCPDKQHFSPTRRICMKASEAKC 184

  Fly   201 YGESQISEPHTDVETTMKVPTANSEGAVTVCYIVGSSEYTTLQQFLTSPEITELPPVTPPSPPRA 265
            .|.::.::              .|:|..|...:                                
  Fly   185 SGGTRENK--------------ESDGPATTGGV-------------------------------- 203

  Fly   266 EANALTCPSTKQ-SYMSHPEDCSKYYICIGGMPVLTSCPKGLFWDQKSGFCEMEKNVKCFQK 326
                  |...|: |.::|..||.|:.:|...|.::..||.||.::..:..|:..|..||..|
  Fly   204 ------CSDEKENSLVAHRSDCGKFMLCSNMMFLVMDCPTGLHFNIATSRCDYPKIAKCQTK 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-FNP_649186.1 CBM_14 43..94 CDD:279884 15/51 (29%)
CBM_14 156..198 CDD:279884 7/41 (17%)
CBM_14 272..321 CDD:279884 15/49 (31%)
obst-GNP_648529.1 CBM_14 32..83 CDD:279884 15/51 (29%)
CBM_14 132..184 CDD:279884 9/51 (18%)
CBM_14 204..256 CDD:279884 15/51 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444039
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG27026
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.960

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