DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-F and CG5883

DIOPT Version :9

Sequence 1:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_648526.2 Gene:CG5883 / 39352 FlyBaseID:FBgn0036225 Length:339 Species:Drosophila melanogaster


Alignment Length:286 Identity:47/286 - (16%)
Similarity:83/286 - (29%) Gaps:117/286 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 ICLGRQEGDLVPHPLDCNGYFSCSR---VPTLLYCDQGLQFDENRAICDLPENTNCRPVATGTVE 103
            ||...::|..:..|..|:....|..   .|.:........:.:::..|....:|.|         
  Fly    34 ICRLFKDGTQLLKPGSCSESIICQNFESTPGITCSGSKPYYSKSKGSCQASADTYC--------- 89

  Fly   104 SANGLADNSELNWWPHKPKPVFVAVDVTSGQPVNPMEKYDPEHIECRHYGAYFLPHPRNCGLYFI 168
                  |.|::                                  |:..|..::....||..::.
  Fly    90 ------DTSKI----------------------------------CKGSGTGYIGDTINCANWYY 114

  Fly   169 C-AYGHLHRHQCGRGTAWNFEKSECQLSDQAICYGESQISEPHTDVETTMKVPTANSEGAVTVCY 232
            | |...|.:..|..|..::.....|..|:..:|                                
  Fly   115 CDADALLGKGTCNLGMYFDQVSKSCVYSEDTVC-------------------------------- 147

  Fly   233 IVGSSEYTTLQQFLTSPEITELPPVTPPSPPRAEANALTCPSTKQSYMSHPEDCSKYYICIGGMP 297
               :::|          ||.::.||  .:|.|.:||                 |.|||.|.....
  Fly   148 ---AAKY----------EICDVAPV--GTPFRDDAN-----------------CHKYYTCSSKSL 180

  Fly   298 VLTSCPKGLFWDQKSGFCEMEKNVKC 323
            |..:|..||:::..:|.|..:|:|.|
  Fly   181 VENTCENGLYYNVATGTCVRKKDVIC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-FNP_649186.1 CBM_14 43..94 CDD:279884 8/53 (15%)
CBM_14 156..198 CDD:279884 9/42 (21%)
CBM_14 272..321 CDD:279884 12/48 (25%)
CG5883NP_648526.2 CBM_14 95..146 CDD:279884 11/50 (22%)
CBM_14 154..204 CDD:279884 18/68 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444030
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.