DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-F and cbd-1

DIOPT Version :9

Sequence 1:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_502145.2 Gene:cbd-1 / 178061 WormBaseID:WBGene00010351 Length:1319 Species:Caenorhabditis elegans


Alignment Length:315 Identity:66/315 - (20%)
Similarity:108/315 - (34%) Gaps:91/315 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LDCN-GYFSCS-RVPTLLYCDQGLQFDENRAICDLPENT-NCRPVATGTVESANGLADNSELNWW 117
            |.|: .|..|| ...::..|:..|.|||....|...:.. .|:            .||.|..:..
 Worm   795 LGCSQKYIQCSDSAASVRECEGSLYFDERSQSCRFRDEVFKCQ------------TADVSSSSTV 847

  Fly   118 PHKPKPVFVAVDVTSGQPVNPME----KYDPEHIECRHYGAYFLP-----------------HPR 161
            |:        :|.|: .|.:|.|    .|:|.       .|.::|                 |..
 Worm   848 PY--------LDFTT-TPASPSEDEPTTYEPS-------VAPYIPSVTVNPVDTCTSLSDGTHGT 896

  Fly   162 NC-GLYFICAYGHL-HRHQCGRGTAWNFEKSECQLSDQ--AICYGESQISE--------PHTDVE 214
            .| ..||:|::|.| ....|..|..::.....|:...:  |....|.:::.        |:..:|
 Worm   897 GCSSFYFVCSHGRLISSGNCQLGEGYDPSVQGCRTFSEIPARACDEQEVTTDAGLVQLMPYKTLE 961

  Fly   215 ---TTMKVPTANSEGAVTVCYIVGSSEYTTLQQFLTSPEITELP----PVTPPSPPRAEANALTC 272
               ||.:..|..:....|..||.||::|:|..    |.|.| :|    ..:..|..||:.::   
 Worm   962 EVLTTTEAATTVANDGPTDTYITGSTKYSTTD----SGEYT-IPYGDETTSTRSYDRADNDS--- 1018

  Fly   273 PSTKQSYMSHPEDCS------------KYYICIGGMPVLTSCPKGLFWDQKSGFC 315
            ...::..:.|.:.|:            .|..|.....|...|..|..:|..|..|
 Worm  1019 EDEEEDDVEHDQKCTVGSRTPVGFCVRTYLECTDAGNVEKLCRIGKLFDSHSNRC 1073

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-FNP_649186.1 CBM_14 43..94 CDD:279884 11/40 (28%)
CBM_14 156..198 CDD:279884 11/62 (18%)
CBM_14 272..321 CDD:279884 10/56 (18%)
cbd-1NP_502145.2 ChtBD2 97..141 CDD:214696
ChtBD2 191..237 CDD:214696
CBM_14 692..743 CDD:307643
CBM_14 785..836 CDD:307643 11/40 (28%)
CBM_14 1108..1161 CDD:307643
CBM_14 1182..1235 CDD:307643
CBM_14 1251..1296 CDD:307643
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167715
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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