DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-F and cpg-1

DIOPT Version :9

Sequence 1:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001021159.1 Gene:cpg-1 / 175586 WormBaseID:WBGene00000465 Length:584 Species:Caenorhabditis elegans


Alignment Length:427 Identity:89/427 - (20%)
Similarity:139/427 - (32%) Gaps:169/427 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PKVRHTVG-----------HLSHICLGRQE-----GDLVPHPLDC-NGYFSCSRVPTLLYCDQGL 77
            |.|.:|.|           .::..|:|:.:     |:...|...| |||.    :|  :.|...|
 Worm   190 PIVPYTTGAPAADEPVTRSAVTKSCVGKADGFYSFGECSDHYTACSNGYL----IP--MQCPARL 248

  Fly    78 QFDENRAICD----LPENTN-----------CRPVATGTVESANGLADNSELNWWPHKPKPVFVA 127
            .|||.|.|||    :||.||           ..|.::|.:..:||..          ..:...||
 Worm   249 AFDEARVICDYVMNVPECTNGSGNDEGSADETTPESSGEMPYSNGYG----------YEETTTVA 303

  Fly   128 VDVTS----GQPV-------NPMEK------------YDPEHIECRHYGAYFLPHPRNCGLYFIC 169
            .||.|    .:|:       .|.||            |:||.:|..  ..|........|     
 Worm   304 EDVPSTKDYAEPIAAAYVARYPSEKTTAENVPTTTIGYEPEVVETT--APYVEETTTTVG----- 361

  Fly   170 AYGHLHRHQCGRGTAWNFEKSECQLSDQAICYGESQISE---PHTD------------------- 212
                 ::.:....|      :|.::....:.| |.:|.|   |:.:                   
 Worm   362 -----YKPEVEETT------TEAEVPTTTVGY-EPEIVETTAPYVEETTTAADVPSTTAVYEPEV 414

  Fly   213 VETT--MKVPTANSEG------AVTVCYIVGSSEYTTLQQFLTS-----PEITE----------- 253
            ||||  .:|||..:.|      ..||.|:   .|.||.....|:     ||:.|           
 Worm   415 VETTTEAEVPTTTTVGYEPEVVETTVPYV---EETTTAADVPTTTVGYEPEVEETTTEAEVPTTT 476

  Fly   254 --------------LP-------PVTPPSPPRAEANALTCPSTKQSYM-------SHPEDCSKYY 290
                          :|       |:...|...|:....|.|:...:.:       :..|.||::|
 Worm   477 VGYESEVVETTAADIPTTTIGYAPIVVESTTAADVPTTTVPAETTTEVPACVEGATAIEPCSQHY 541

  Fly   291 -ICIGGMPVLTSCPKGLFWDQKSGFC-EMEKNVKCFQ 325
             .|:.|...:..|..|||:..:...| ..::..:|.|
 Worm   542 KNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQ 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-FNP_649186.1 CBM_14 43..94 CDD:279884 22/71 (31%)
CBM_14 156..198 CDD:279884 3/41 (7%)
CBM_14 272..321 CDD:279884 12/57 (21%)
cpg-1NP_001021159.1 CBM_14 61..113 CDD:279884
CBM_14 214..266 CDD:279884 19/57 (33%)
CBM_14 <537..576 CDD:279884 10/38 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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