DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-F and Gm30500

DIOPT Version :9

Sequence 1:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_017171830.1 Gene:Gm30500 / 102632425 MGIID:5589659 Length:614 Species:Mus musculus


Alignment Length:413 Identity:85/413 - (20%)
Similarity:118/413 - (28%) Gaps:168/413 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QLGAGHAVDQSWELPKVRHTVGHLSHICLGRQEGDLVPHPLDCNGYFSCSRVPTLLYCDQGLQFD 80
            |.|.|..|......|     |||...:.||.    .:|.|:   |.||                 
Mouse    84 QPGVGFHVTAETACP-----VGHFCPVGLGM----ALPCPV---GTFS----------------- 119

  Fly    81 ENRAICDLPENTNCRPVATGTVESANGLADNSELNWWPHKPKPVFVAVDVTSGQPVN-------- 137
             :|..  |..::.|.|...|...:|:||:..|    .|..| ..|....|:|..|..        
Mouse   120 -DRMF--LSMSSECLPCPPGHFCAASGLSAPS----GPCAP-GYFCLSGVSSPTPTGRSGHGGPC 176

  Fly   138 PMEKYDPEHIE----CR--HYGA-------------YFLP--------HPRNCGLY--------- 166
            |...:.|....    ||  .||:             |:.|        :|...|.|         
Mouse   177 PQGHFCPRGTSLPQPCRAGSYGSLLGQVSCFPCPAGYYCPENITSYSGYPCPAGFYCPRGTKHAA 241

  Fly   167 -FICAYGHLH----------------RHQCGR-----------------GTAW--------NFEK 189
             |.|..|:.:                .|.||:                 ..||        |:..
Mouse   242 QFPCPRGYYNPDPLTHSLDSCLPCPPGHYCGQENLTKPSGPCDAGWYCVSAAWNARPFDLDNYTS 306

  Fly   190 SECQLSDQAI---CYGESQISE---------PHTDVETT-MKVPTANSEGAVTVCYIVGSSEYTT 241
            :.|.....|.   |...|...|         |.:...|: :..||...:...   :.:|.||   
Mouse   307 TNCLCPATATGGKCPAGSYCPEGSPEPIPCTPGSFCATSGLPTPTGPCQAGY---FCIGGSE--- 365

  Fly   242 LQQFLTSP----EITELPPVTPPSP--PRAEANALTCPSTKQSYMSHPE--------DC-SKYYI 291
                  ||    |:|..|  .||..  |.|......||  ..::.|.||        .| |.:|.
Mouse   366 ------SPAPVDEVTGGP--CPPGSYCPVASHKPTPCP--VGTFSSLPEQTTSSTCRSCPSGFYC 420

  Fly   292 CIGGMPVLTS-CPKGLFWDQKSG 313
            ...|:...:. ||.|.:.|..:|
Mouse   421 KEAGLQAPSGWCPAGYYCDSSTG 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-FNP_649186.1 CBM_14 43..94 CDD:279884 9/50 (18%)
CBM_14 156..198 CDD:279884 14/100 (14%)
CBM_14 272..321 CDD:279884 14/52 (27%)
Gm30500XP_017171830.1 TNFRSF 394..518 CDD:389949 14/52 (27%)
CRD1 394..411 CDD:276900 5/18 (28%)
CRD2 414..451 CDD:276900 9/30 (30%)
CRD3 453..506 CDD:276900
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.