DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssk and W03C9.2

DIOPT Version :9

Sequence 1:NP_649184.1 Gene:Ssk / 40207 FlyBaseID:FBgn0036945 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_496548.2 Gene:W03C9.2 / 174833 WormBaseID:WBGene00012220 Length:371 Species:Caenorhabditis elegans


Alignment Length:103 Identity:21/103 - (20%)
Similarity:32/103 - (31%) Gaps:34/103 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TVGSIFIKALKLIINLVIIFLY---------RWGDGGEFLGIGGTW--NLNEEKSADAEIVASGV 59
            |:||:|.:|  .:.|:...|.:         .|......|.|.|..  |.:..|.:..|.:    
 Worm   226 TIGSVFAQA--FVANISKSFRHIKPLEQESSLWPMAMRNLLIPGALGANSSSSKGSSEEKI---- 284

  Fly    60 MVGFLIYTGCHTIAFAFGTTKHKGELCDTIMNVVGCIM 97
                             |..|.|.:.||.......||:
 Worm   285 -----------------GNKKRKRQECDHNEESFECIL 305



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S12566
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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