DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-J and obst-H

DIOPT Version :10

Sequence 1:NP_649179.2 Gene:obst-J / 40202 FlyBaseID:FBgn0036940 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001034020.1 Gene:obst-H / 39681 FlyBaseID:FBgn0053983 Length:269 Species:Drosophila melanogaster


Alignment Length:279 Identity:54/279 - (19%)
Similarity:79/279 - (28%) Gaps:108/279 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 WQMLPHKDHCQRFYVCTGDDDMPFQEFNCPAEYHFSKKLMICVPGACTDESVFCGLTNSVERVQS 100
            |....:.||   |..|.|.||..|                                      |||
  Fly    14 WSSRINADH---FDECDGMDDGAF--------------------------------------VQS 37

  Fly   101 --DCTRYRQCLEGGSFAVAKCSVGNYFDPARRAC-----------------------------LP 134
              .|..|..| ||.......|..|.|||.....|                             :|
  Fly    38 WESCQSYVYC-EGEESLKGDCEDGEYFDSEAGTCDIAANVSCFLDEVDEPSDPEPETDEEEEEIP 101

  Fly   135 -------------------VAISAAHQCSCVLPDN----ATLANPSDCETYFRCHSGQAELVQCP 176
                               :.|:...:.:|.:.|:    ..:|:.:.|..|:.|:.|.|..:.|.
  Fly   102 ATPRPTEPPIVETPTEVDIINIAPVVRPNCPISDDPGQVIFMASNNSCTNYYLCYHGHAMEMHCD 166

  Fly   177 SGDYFDERVSSC-VPDHTGICLEKPTMPPTLTEQALAMDECIRTGSRLAPHSRDCQRYYICAKKR 240
            :..||:.....| .||......|.|           ...:|:...:...||..:|..:|.|.|..
  Fly   167 NELYFNSLTGQCDYPDKVQCAFEDP-----------RSHKCLPHMTEFFPHPDNCNYFYYCIKGF 220

  Fly   241 VLEMRCPRGQYFDVVRRYC 259
            :...:||....:|:.||.|
  Fly   221 LTLQQCPFYYGWDIERRSC 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-JNP_649179.2 ChtBD2 <40..79 CDD:214696 8/38 (21%)
CBM_14 145..192 CDD:426342 13/51 (25%)
CBM_14 216..259 CDD:426342 12/42 (29%)
obst-HNP_001034020.1 CBM_14 26..77 CDD:426342 19/89 (21%)
CBM_14 142..184 CDD:426342 12/41 (29%)
ChtBD2 203..240 CDD:214696 12/37 (32%)

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