DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment obst-J and CG4835

DIOPT Version :9

Sequence 1:	NP_649179.2	Gene:	obst-J / 40202	FlyBaseID:	FBgn0036940	Length:	353	Species:	Drosophila melanogaster
Sequence 2:	NP_647965.3	Gene:	CG4835 / 38619	FlyBaseID:	FBgn0035607	Length:	1224	Species:	Drosophila melanogaster

Alignment Length:	336	Identity:	67/336 - (19%)
Similarity:	108/336 - (32%)	Gaps:	115/336 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly    34 DPWQMLPHKD--------HCQRFYVCTGDDDMPFQEFNCPAEYHFSKKLMIC------------- 77
            ||......||        :|..:.:|   .|...|..:||....|:..|::|
  Fly   389 DPNDCKDEKDGTIFAYIGNCSEYLIC---KDNQVQMGHCPPNTLFNPDLLVCDEPDDVVCLGDRT 450

  Fly    78 -------VPGACTDESVFCGLTNSVERV------------------QSDCTRYRQCLEGGSFAVA 117
                   :|...|:::.....|.:|...                  ..||::|..||.||.:.:|
  Fly   451 TTPIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQELGASFSYPDDCSKYYLCLGGGQWTLA 515

  Fly   118 KCSVGNYFDPARRACLP----------------------------------VAISAAHQCSCVLP 148
            .|..|:||||:...|.|                                  .|.:.....:.|.|
  Fly   516 PCIYGSYFDPSTGQCGPDVAPDACKPSQVTTTTTTTTTETTTTERNTTPKSTATTTERTTTTVAP 580

  Fly   149 ---------DNATLANPSDCETYFRCHSGQAELVQCPSGDYFDERVSSCVP---------DHTGI 195
                     :|..:|.|::|..|..|.|.......||.|.:|..::..|:.         |.:..
  Fly   581 KTGICGGRNENENIAYPNNCTKYIVCVSPIPIAFFCPDGTFFSSKLEKCIDDWDESDCEGDQSTT 645

  Fly   196 CLE----KPTMPPTLTEQALAMDECIRTGSRLAPHSRDCQRYYICAKKRVLEMR-CPRGQYFDVV 255
            .||    :|...||:         |..:.....|:..:||.:..|....:..|. |..|:|:|.:
  Fly   646 TLEPGYTRPPPEPTM---------CTNSSRDTFPYPDNCQWFIRCVDDYIYMMDVCNCGEYYDPI 701

  Fly   256 RRYCALDLGSE 266
            ...|..|:.|:
  Fly   702 TEKCGADVPSD 712

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
obst-J	NP_649179.2	ChtBD2	<40..79	CDD:214696	11/66 (17%)
		CBM_14	145..192	CDD:279884	14/64 (22%)
		CBM_14	216..259	CDD:279884	10/43 (23%)
CG4835	NP_647965.3	CBM_14	51..103	CDD:279884
		CBM_14	185..237	CDD:279884
		CBM_14	273..322	CDD:279884
		CBM_14	393..444	CDD:279884	11/53 (21%)
		CBM_14	485..539	CDD:279884	16/53 (30%)
		CBM_14	585..638	CDD:279884	12/52 (23%)
		CBM_14	661..714	CDD:279884	13/52 (25%)
		CBM_14	744..796	CDD:279884
		CBM_14	914..962	CDD:279884
		CBM_14	1175..1212	CDD:279884
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45444104
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D29657at33392
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23301
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.950