DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-J and C39D10.7

DIOPT Version :10

Sequence 1:NP_649179.2 Gene:obst-J / 40202 FlyBaseID:FBgn0036940 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_509334.3 Gene:C39D10.7 / 181050 WormBaseID:WBGene00016534 Length:1171 Species:Caenorhabditis elegans


Alignment Length:353 Identity:71/353 - (20%)
Similarity:116/353 - (32%) Gaps:103/353 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CQRFYVCTGDDDMPFQEFNCPAEYHFSKKLMICVPGACTDESVFCGLTNSVERVQSDCTRYRQCL 109
            |:.:|:...:.:....  .|||...:||....|               :..|.|: ||..|:...
 Worm   786 CEDYYISCNNFETTIN--RCPAGLFYSKLNNRC---------------DYKEHVE-DCPEYKPTP 832

  Fly   110 EGGSFA----VAKCSVGNY--FDPARRACLPV---AISAAHQCSCVLPDNATLANPSDCETYFRC 165
            .....|    ..|.:..||  .|.......||   .::.|..|| ..|| ...|.|...:.|.:|
 Worm   833 STTPAAEQPGTTKYTTYNYPNIDYTSTTPGPVDTTPLAKAFSCS-GRPD-GIYALPYCSQDYVQC 895

  Fly   166 HSGQAELVQCPSGDYFDERVSSCVPDHTGICLEKPTMPPTLTEQALAMDEC-IRTGSRLAP---- 225
            ..|::.:..|..|.:::|:...|...||                   :|.| |..||.:..    
 Worm   896 MQGRSLISSCAPGLFYNEKNGMCAYKHT-------------------VDTCKIGKGSDIIDSNAC 941

  Fly   226 -------HSRDCQRYYI-CAKKRVLEMRCPRGQYFDVVRRYCALDL-GSECQALQAEKQDLELEE 281
                   :|..|..||. |..:::.:|.||....|......|...: ..||              
 Worm   942 FGKSDGYYSAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKEC-------------- 992

  Fly   282 NIQVELEK------------------NIQMDIPAKHKVKNQGH-------KPVQKNSEKEVVRDQ 321
            :|...|::                  :::|..| .:.|.:.|.       .|:..|.:.:....:
 Worm   993 SIATTLDRTPPAVPSDFCTIRSNGLHHLKMCSP-HYIVCDNGRAFSGTCIAPLVYNGDTQTCNYK 1056

  Fly   322 ELPVPQANDKLPQPSAEAVSSYDKFSSK 349
            .......||.:| |.||..|||..:::|
 Worm  1057 STNKDCGNDYIP-PVAEVTSSYTTYTTK 1083

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-JNP_649179.2 ChtBD2 <40..79 CDD:214696 8/33 (24%)
CBM_14 145..192 CDD:426342 11/46 (24%)
CBM_14 216..259 CDD:426342 13/55 (24%)
C39D10.7NP_509334.3 ChtBD2 27..70 CDD:214696
CBM_14 98..148 CDD:426342
ChtBD2 188..236 CDD:214696
ChtBD2 337..384 CDD:214696
CBM_14 419..467 CDD:426342
CBM_14 560..612 CDD:426342
CBM_14 675..726 CDD:426342
CBM_14 774..825 CDD:426342 10/56 (18%)
CBM_14 875..927 CDD:426342 16/72 (22%)
CBM_14 941..992 CDD:426342 10/50 (20%)
CBM_14 1010..1062 CDD:426342 6/52 (12%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.