DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-J and cbd-1

DIOPT Version :10

Sequence 1:NP_649179.2 Gene:obst-J / 40202 FlyBaseID:FBgn0036940 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_502145.2 Gene:cbd-1 / 178061 WormBaseID:WBGene00010351 Length:1319 Species:Caenorhabditis elegans


Alignment Length:174 Identity:43/174 - (24%)
Similarity:70/174 - (40%) Gaps:39/174 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 CPAEYHFSKKLMICV----PGACT--------------DESVFC-GLTNSVERVQSDCTRYRQCL 109
            |..:..||...:.|:    ..|||              |:|.|| |..:.:.|.:.||:...||.
 Worm  1139 CSEDRVFSNDKLECIVRESVSACTVPKNPSIKKYYTSNDQSAFCDGKEDGLYRNERDCSAILQCF 1203

  Fly   110 EGGSFAVAKCSVGNYFDPARRAC-LPVAISAAH-------QCSCVLPDNATLANPSDCETYFRCH 166
            .|..|....|.....|:.....| .|..:|...       :||   ...:.:|:.::||.::||.
 Worm  1204 GGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCENHGQTNGECS---EHGSFIADANNCEVFYRCV 1265

  Fly   167 SGQAELVQCPSGDYFDERVSSCVPDHTGICLEKPTMPPTLTEQA 210
            .|:..::.||||..|:..:|.|         :.|:..|:.:.||
 Worm  1266 WGRKVVMTCPSGTVFNPLLSVC---------DWPSAVPSCSGQA 1300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-JNP_649179.2 ChtBD2 <40..79 CDD:214696 4/18 (22%)
CBM_14 145..192 CDD:426342 13/46 (28%)
CBM_14 216..259 CDD:426342
cbd-1NP_502145.2 ChtBD2 97..141 CDD:214696
ChtBD2 191..237 CDD:214696
CBM_14 692..743 CDD:426342
CBM_14 785..836 CDD:426342
CBM_14 1108..1161 CDD:426342 4/21 (19%)
CBM_14 1182..1235 CDD:426342 14/52 (27%)
CBM_14 1251..1296 CDD:426342 15/53 (28%)
Blue background indicates that the domain is not in the aligned region.

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