DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-J and cpg-2

DIOPT Version :10

Sequence 1:NP_649179.2 Gene:obst-J / 40202 FlyBaseID:FBgn0036940 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_498551.3 Gene:cpg-2 / 175991 WormBaseID:WBGene00015102 Length:524 Species:Caenorhabditis elegans


Alignment Length:388 Identity:69/388 - (17%)
Similarity:110/388 - (28%) Gaps:154/388 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLAIATALVKAELTDISAICRISDPWQMLPHKDHCQ-RFYVCTGDDDMPFQEFNCPAEYHFSKKL 74
            |||.|||.....|.|    |  ::....|.....|: :|..|:|.   ..:..:|||:..:::.|
 Worm     9 LLAFATAANGQFLQD----C--TNALDGLYALGECEPQFLTCSGG---IARIMDCPADLIYNEPL 64

  Fly    75 MIC----------------------------------------------VPGACTDESVFCGLTN 93
            :||                                              ..|..:.|:...|..:
 Worm    65 LICDWRHNVIGCEGSGESSGETSGEGSGESSGEASGEGSGEASGEGSGEASGEGSGEASGEGSGS 129

  Fly    94 SVERVQSDCTRYRQCLEGGSFAVAKCSVGNYF---DPARRACLPVAI------------SAAHQC 143
            ..|.|::.|    :.||.|:::...|:...:|   :.||....|..:            |...:|
 Worm   130 GEETVENVC----ENLEDGAYSSGGCTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190

  Fly   144 SCVLPDNATLANPSD-------------------------------------------------- 158
            .    ::.|:.:.|.                                                  
 Worm   191 K----EDLTITDGSGETSGEGSGEASGEASGEGSGEASGESSGQGSGEASGEGSGELEPTCEGKA 251

  Fly   159 --------CETYF-RCHSGQAELVQCPSGDYFDERVSSC-VPDHTGICLEKPTMPPTLTEQA-LA 212
                    |.|.| .|..|.|.::.||:...|:..:..| .|.....|...||..||..|.. .:
 Worm   252 DGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTPQPTCEEDGYFS 316

  Fly   213 MDECIRTGSRLAPHSRDCQRYYICAKKRVLEMRCPRGQYFDVVRRYCALDLG-SECQALQAEK 274
            ..:|             ...:..|...|.:.|.||.|..|......|..:.. ||||....|:
 Worm   317 FGQC-------------SSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEE 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-JNP_649179.2 ChtBD2 <40..79 CDD:214696 10/85 (12%)
CBM_14 145..192 CDD:426342 13/106 (12%)
CBM_14 216..259 CDD:426342 8/42 (19%)
cpg-2NP_498551.3 CBM_14 24..76 CDD:426342 12/56 (21%)
CBM_14 138..190 CDD:426342 10/55 (18%)
ChtBD2 245..293 CDD:214696 10/47 (21%)
CBM_14 311..359 CDD:426342 11/60 (18%)
CBM_14 403..454 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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