DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir76b and ATGLR1.2

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_199651.1 Gene:ATGLR1.2 / 834895 AraportID:AT5G48400 Length:867 Species:Arabidopsis thaliana


Alignment Length:530 Identity:117/530 - (22%)
Similarity:182/530 - (34%) Gaps:147/530 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NLIQMGE--------NGTLSPVTELPMDVDASEA----GFDADAPV-ETLETINRKKPKLREMLD 78
            |:|..||        ||:.|...:|....|..|.    |..|.:|. .:|....||  ||| :|.
plant   385 NMIGSGERRVGFWNSNGSFSNRRQLSSTHDNLETIIWPGGSAQSPKGRSLRESGRK--KLR-VLV 446

  Fly    79 WIGGKHLRIATLEDFPLSYTEVLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSPSDF 143
            ....:..|:..:|..|:::...:..|                    |..||.  |.:|  :|.::
plant   447 TSSNRFPRLMKVETDPITHEITIVEG--------------------FCIEVF--QASI--APFNY 487

  Fly   144 DRSLIEMVNSST--------------VDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRE 194
            :...|..:|.:.              .|.|...|...||:..:|.:   ||...|          
plant   488 EVEYIRWLNGTNYTKLAYALHSQKDKYDAAVGDITITSDRSMYVDF---TLPYTE---------- 539

  Fly   195 SASGSGLLAPFE--FWV---------WILILVSLLAVGPIIYALIILRNR-LTGDGQQTPYSLGH 247
              .|.|::|..|  .||         ||......:..|.|::.:....|: ..|   ..|..:|.
plant   540 --MGLGIVAAKERSMWVFFQPLTPNLWITSAAFFVLTGIIVWLIERAENKEFQG---SWPQQIGV 599

  Fly   248 CAWF-----VYGALMKQGSTLSPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNT 307
            ..||     ||....|....||      |.:...|...:.||.:.|||.||:.:|:.:  :.:|.
plant   600 VIWFGFSTLVYAHREKLQHNLS------RFVVTVWVFAVLILVTSYTATLTSMMTVQQ--IRFNA 656

  Fly   308 VNDILTKNKHFVSMRGGGVEYAIRTTNESLSMLNRMIQNNYAVFSDETNDTYNLQNYVEKNGYVF 372
                   |:.:|....|.:......||.||..: |::..|       |::.| .|..:.|:....
plant   657 -------NEDYVGHLSGSLIANAALTNSSLRAM-RLLGLN-------TSEDY-AQALMNKSVSYI 705

  Fly   373 VRDRPAINIMLYRDYLYRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHL 437
            |.:.|.:.|:|            .:...|  |.|.|.........|.:..||.|:.....|:..|
plant   706 VSELPYLKILL------------GENPGH--FLMVKTQSTTNGFGFMFQKGSELAPNVSREIAKL 756

  Fly   438 VESGIVKHLSKRNLPSAEICPQDLGGTERQLRNGDLMMTYY-----IMLAG--FATALAVFSTEL 495
            ..|..:..:.:|.....  .|.....|...:       |.|     .|:.|  ||.||||    |
plant   757 RTSERLNEMERRWFDKQ--LPYTTDDTSNPI-------TLYRFRGLFMITGVSFAFALAV----L 808

  Fly   496 MFRYVNSRQE 505
            :..::..|.|
plant   809 LILWLRERWE 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 79/384 (21%)
ATGLR1.2NP_199651.1 PBP1_GABAb_receptor 41..407 CDD:107361 7/21 (33%)
ANF_receptor 55..387 CDD:279440 1/1 (100%)
GluR_Plant 440..770 CDD:270404 87/412 (21%)
Lig_chan 563..801 CDD:278489 61/287 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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