DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and ATGLR1.2

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_199651.1 Gene:ATGLR1.2 / 834895 AraportID:AT5G48400 Length:867 Species:Arabidopsis thaliana


Alignment Length:530 Identity:117/530 - (22%)
Similarity:182/530 - (34%) Gaps:147/530 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NLIQMGE--------NGTLSPVTELPMDVDASEA----GFDADAPV-ETLETINRKKPKLREMLD 78
            |:|..||        ||:.|...:|....|..|.    |..|.:|. .:|....||  ||| :|.
plant   385 NMIGSGERRVGFWNSNGSFSNRRQLSSTHDNLETIIWPGGSAQSPKGRSLRESGRK--KLR-VLV 446

  Fly    79 WIGGKHLRIATLEDFPLSYTEVLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSPSDF 143
            ....:..|:..:|..|:::...:..|                    |..||.  |.:|  :|.::
plant   447 TSSNRFPRLMKVETDPITHEITIVEG--------------------FCIEVF--QASI--APFNY 487

  Fly   144 DRSLIEMVNSST--------------VDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRE 194
            :...|..:|.:.              .|.|...|...||:..:|.:   ||...|          
plant   488 EVEYIRWLNGTNYTKLAYALHSQKDKYDAAVGDITITSDRSMYVDF---TLPYTE---------- 539

  Fly   195 SASGSGLLAPFE--FWV---------WILILVSLLAVGPIIYALIILRNR-LTGDGQQTPYSLGH 247
              .|.|::|..|  .||         ||......:..|.|::.:....|: ..|   ..|..:|.
plant   540 --MGLGIVAAKERSMWVFFQPLTPNLWITSAAFFVLTGIIVWLIERAENKEFQG---SWPQQIGV 599

  Fly   248 CAWF-----VYGALMKQGSTLSPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNT 307
            ..||     ||....|....||      |.:...|...:.||.:.|||.||:.:|:.:  :.:|.
plant   600 VIWFGFSTLVYAHREKLQHNLS------RFVVTVWVFAVLILVTSYTATLTSMMTVQQ--IRFNA 656

  Fly   308 VNDILTKNKHFVSMRGGGVEYAIRTTNESLSMLNRMIQNNYAVFSDETNDTYNLQNYVEKNGYVF 372
                   |:.:|....|.:......||.||..: |::..|       |::.| .|..:.|:....
plant   657 -------NEDYVGHLSGSLIANAALTNSSLRAM-RLLGLN-------TSEDY-AQALMNKSVSYI 705

  Fly   373 VRDRPAINIMLYRDYLYRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHL 437
            |.:.|.:.|:|            .:...|  |.|.|.........|.:..||.|:.....|:..|
plant   706 VSELPYLKILL------------GENPGH--FLMVKTQSTTNGFGFMFQKGSELAPNVSREIAKL 756

  Fly   438 VESGIVKHLSKRNLPSAEICPQDLGGTERQLRNGDLMMTYY-----IMLAG--FATALAVFSTEL 495
            ..|..:..:.:|.....  .|.....|...:       |.|     .|:.|  ||.||||    |
plant   757 RTSERLNEMERRWFDKQ--LPYTTDDTSNPI-------TLYRFRGLFMITGVSFAFALAV----L 808

  Fly   496 MFRYVNSRQE 505
            :..::..|.|
plant   809 LILWLRERWE 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 21/122 (17%)
Lig_chan 209..458 CDD:459656 56/263 (21%)
ATGLR1.2NP_199651.1 PBP1_GABAb_receptor_plant 41..407 CDD:380645 7/21 (33%)
GluR_Plant 440..770 CDD:270404 87/412 (21%)

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