DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and GLR2.1

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_198062.2 Gene:GLR2.1 / 832768 AraportID:AT5G27100 Length:901 Species:Arabidopsis thaliana


Alignment Length:584 Identity:117/584 - (20%)
Similarity:204/584 - (34%) Gaps:138/584 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NGTLSPVTELPMDVDAS---EAGF---------DADAPVETLETINRKKPKLREMLDWIG----- 81
            ||.|.|.....::|:..   ..||         :.|....:..|.:..:.:||.:: |.|     
plant   378 NGELQPSVFEIVNVNGQGGRTIGFWMKEYGLFKNVDQKPASKTTFSSWQDRLRPII-WPGDTTSV 441

  Fly    82 ---------GKHLRIA-----TLEDFPLSYTEVLENGTRVGHGVSFQIIDFLKK-----KFNFTY 127
                     ||.|:|.     |.:.|..:..:.:.|.| :..|.|   ||:.:.     .::.:|
plant   442 PKGWEIPTNGKRLQIGVPVNNTFQQFVKATRDPITNST-IFSGFS---IDYFEAVIQAIPYDISY 502

  Fly   128 EVVVPQDNIIGSPSDFDRSLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRP 192
            :.:..||      ..:| :|:..|.....|...|.....|::..:|.:|......|..::|..:.
plant   503 DFIPFQD------GGYD-ALVYQVYLGKYDAVVADTTISSNRSMYVDFSLPYTPSGVGLVVPVKD 560

  Fly   193 RESASGSGLLAPFEFWVWILILVSLLAVGPIIYALIILRNRLT----GDGQQTPYSLGHCAWFVY 253
            ....|.:..|.|....:|::.|:|...:|.:::   :|.:|:.    |.||   |.|....||.:
plant   561 SVRRSSTIFLMPLTLALWLISLLSFFIIGLVVW---VLEHRVNPDFDGPGQ---YQLSTIFWFSF 619

  Fly   254 GALMKQGSTLSP----IADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDILTK 314
            ..::     .:|    ::...|::...|:..:.:||..|||:|.:.||..........:|.:|.|
plant   620 SIMV-----FAPRERVLSFWARVVVIIWYFLVLVLTQSYTASLASLLTTQHLHPTVTNINSLLAK 679

  Fly   315 NKHFVSMRGGGVEYAIRTTNESLSMLNRMIQNNY------AVFSDETNDTYNLQNYVEKNGYVFV 373
                    |..|.|      :|..:|.|:..:.:      :..|.|..|....:...|......:
plant   680 --------GESVGY------QSSFILGRLRDSGFSEASLVSYGSPEHCDALLSKGQAEGGVSAVL 730

  Fly   374 RDRPAINIMLYRDYLYRKTVSFSDEKVHC-PFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHL 437
            .:.|.:.|.|.:               :| .:.|.:.||......|.:||||.|.......:|.:
plant   731 MEVPYVRIFLGQ---------------YCNKYKMVQTPFKVDGLGFVFPIGSPLVADISRAILKV 780

  Fly   438 VESGIVKHLSKRNL-PSAEICPQDLGGTE-------RQLRNGDLMMTYYIMLAGFATALAVFSTE 494
            .||.....|..... |..|.||..|...:       |||......:.:.:.......||..|..:
plant   781 EESNKANQLENAWFKPIDESCPDPLTNPDPNPSVSFRQLGFDSFWVLFLVAAIVCTMALLKFVYQ 845

  Fly   495 LMFRYVNSRQEANKWAR-------------------HGIGRTPNGQSVAPSRWLRGWRRLNSGH 539
            .:....|.|.....|.:                   .|.|...|||        .|...:|:|:
plant   846 FLKENPNQRNLRVLWEKFNEPDQKSYIKDVTKCQCSSGQGMPKNGQ--------EGANAVNNGN 901

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 24/118 (20%)
Lig_chan 209..458 CDD:459656 56/264 (21%)
GLR2.1NP_198062.2 PBP1_GABAb_receptor_plant 33..411 CDD:380645 7/32 (22%)
GluR_Plant 452..794 CDD:270404 81/392 (21%)
Lig_chan 574..833 CDD:459656 62/298 (21%)

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