DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and GLR2.5

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001332219.1 Gene:GLR2.5 / 830991 AraportID:AT5G11210 Length:918 Species:Arabidopsis thaliana


Alignment Length:471 Identity:99/471 - (21%)
Similarity:168/471 - (35%) Gaps:106/471 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ENGTLSPVTELPMDVDAS---EAGF--DADAPVETL--ETINRKKPKLREMLDWIG--------- 81
            :||.|...|...::::.|   ..||  .....|::|  :.::....:||.:: |.|         
plant   386 KNGKLEATTFKIINIEESGERTVGFWKSKVGLVKSLRVDKVSHSSRRLRPII-WPGDTIFVPKGW 449

  Fly    82 -----GKHLRIAT-LEDFPLSYTEVL-ENGTRVGHGVSFQIIDFLKKKFNFTYEV---VVPQDNI 136
                 .|.||||. .:|...::.||. :..|.|.....|.|..|........|.|   .:|.|..
plant   450 EFPTNAKKLRIAVPKKDGFNNFVEVTKDENTNVPTVTGFCIDVFNTVMSQMPYAVSYEYIPFDTP 514

  Fly   137 IGSPSDFDRSLIEMVNSSTVDLAAAFIPSLSDQRSFV----YYSTTTL----------DEGEWIM 187
            .|.|......::..|.....|.|......|:::..:|    .||.|.:          ::|||: 
plant   515 DGKPRGSYDEMVYNVFLGEFDGAVGDTTILANRSHYVDFALPYSETGIVFLVPVKDGKEKGEWV- 578

  Fly   188 VMQRPRESASGSGLLAPFEFWVWILILVSLLAVGPIIYALII-----LRNRLTGDGQQTPYSLGH 247
                         .|.|....:|::...|.|.:|.:::....     .|.::..|      .:..
plant   579 -------------FLKPLTKELWLVTAASFLYIGIMVWIFEYQADEEFREQMIID------KISS 624

  Fly   248 CAWFVYGALMKQGSTLSPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDIL 312
            ..:|.:..|.......|. :..||:|...|...:.|||..|||.||:.|          ||.::.
plant   625 VFYFSFSTLFFAHRRPSE-SFFTRVLVVVWCFVLLILTQSYTATLTSML----------TVQELR 678

  Fly   313 TKNKHFVSMRGGGVEYAIRTTNESLSMLNRMIQNNYAVFSDETNDTYNLQNYVEKNGYVFVRDRP 377
            ...:|...:|..||....:|.:.:...|.:|      .|.:....|||....:.:          
plant   679 PTVRHMDDLRKSGVNIGYQTGSFTFERLKQM------RFDESRLKTYNSPEEMRE---------- 727

  Fly   378 AINIMLYRDYLYRKTVSFSDEKVHCPFAMAK--------EPFLKKKR-TFAYPIGSNLSQLFDPE 433
               :.|::........:| ||..:....|||        ||..|... .||:|:||.|......:
plant   728 ---LFLHKSSNGGIDAAF-DEVAYIKLFMAKYCSEYSIIEPTFKADGFGFAFPLGSPLVSDISRQ 788

  Fly   434 LLHLVESGIVKHLSKR 449
            :|::.|...:|.:..:
plant   789 ILNITEGDAMKAIENK 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 30/127 (24%)
Lig_chan 209..458 CDD:459656 54/255 (21%)
GLR2.5NP_001332219.1 PBP1_GABAb_receptor_plant 38..421 CDD:380645 8/34 (24%)
GluR_Plant 456..806 CDD:270404 86/400 (22%)
Lig_chan 584..838 CDD:459656 54/258 (21%)

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