DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and GLR2.4

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001328410.1 Gene:GLR2.4 / 829299 AraportID:AT4G31710 Length:912 Species:Arabidopsis thaliana


Alignment Length:476 Identity:96/476 - (20%)
Similarity:180/476 - (37%) Gaps:101/476 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 TLETINRKKPKLREMLDWIGGKHLRIATLEDFPLSYTEVLENGTRVGHGVSFQII-DFLKKKFN- 124
            |..|.:..|..|..:| |.|      .|| ..|..: |:..||..:..||..... .|:|...: 
plant   440 TTRTFSSWKNHLNPIL-WPG------ITL-TVPKGW-EIPTNGKELQIGVPVGTFPQFVKVTTDP 495

  Fly   125 FTYEVVVPQDNIIGSPSDFDRSLIEMVNSSTVDLAAAFIP------------SLSDQRSFVYYST 177
            .|:|.:|     .|...||..::|:   :...|::..|||            .|:::.|:|.::.
plant   496 LTHETIV-----TGFCIDFFEAVIQ---AMPYDVSHRFIPFGDDDGKTNDTTILANRSSYVDFTL 552

  Fly   178 TTLDEGEWIMVMQRPRESASGSGLLAPFEFWVWILILVSLLAVGPIIYALIILRNRLTGDGQQTP 242
            .....|..::|..:...:.|......|....:|.:.|.|...||.:::   ||.:|:..:....|
plant   553 PYTTSGVGMVVPLKDNVARSSLIFFKPLTPGLWGMTLGSFFVVGFVVW---ILEHRVNSEFTGPP 614

  Fly   243 -YSLGHCAWFVYGALMKQGSTLSP----IADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFT 302
             |.:....||.:..::     .:|    ::.:.|::..||:..:.:||..|||:|::.||..:..
plant   615 QYQISTMFWFAFSIMV-----FAPRERVMSFTARVVVITWYFIVLVLTQSYTASLSSLLTTQQLN 674

  Fly   303 LPYNTVNDILTKNKHFVSMRGGGVEYAIRTTNESLSMLNRMIQNNY-----AVFSDETNDTYNLQ 362
            ....::.::|.|        ||.|.|     .....:|.::.::.:     ..|:........|.
plant   675 PTETSIKNVLAK--------GGPVAY-----QRDSFVLGKLRESGFPESRLVPFTSPEKCEELLN 726

  Fly   363 NYVEKNGY--VFVRDRPAINIMLYRDYLYRKTVSFSDEKVHC-PFAMAKEPFLKKKRTFAYPIGS 424
            ....|.|.  .|: :.|.:.:.|.:               :| .:.|.:.||......|.:||||
plant   727 KGPSKGGVSAAFM-EVPYVRVFLGQ---------------YCKKYKMVEVPFDVDGFGFVFPIGS 775

  Fly   425 NLSQLFDPELLHLVESGIVKHLSK---RNLPSAEICPQDLGGTE-------RQLRNGDLMMTYYI 479
            .|.......:|.:.||.....|..   :|:.  :.||..:...:       |:|.....::.:  
plant   776 PLVADVSRAILKVAESNKATQLETAWFKNID--KTCPDPMNNPDPNPTVSFRKLSLDSFLLLF-- 836

  Fly   480 MLAGFATALAVFSTELMFRYV 500
                  .|.|...|..:.::|
plant   837 ------VAAATVCTLALLKFV 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 77/380 (20%)
GLR2.4NP_001328410.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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