DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and GLR5

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_565744.1 Gene:GLR5 / 817801 AraportID:AT2G32400 Length:921 Species:Arabidopsis thaliana


Alignment Length:504 Identity:121/504 - (24%)
Similarity:189/504 - (37%) Gaps:104/504 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ASEAGFDADAPVETLETINRKK-------PKLREMLDWIGGKHLR-----IATLEDFPL------ 95
            :...||...||    :|.:.:|       .||.: :.|.||...:     ||...| ||      
plant   407 SKNGGFSVVAP----KTRHSQKKTSFVSDEKLGD-ITWPGGGREKPRGWVIADSAD-PLKIVVPR 465

  Fly    96 --SYTEVLENGTRVGHGVSFQIIDFLKKKFNFT-YEV---VVPQDNIIGSPSDFDRSLIEMVNSS 154
              |:.|.:.......|.:....||...:...|. |.|   ..|..|...||:  ...||:||...
plant   466 RVSFVEFVTEEKNSSHRIQGFCIDVFIEALKFVPYSVPYIFEPFGNGHSSPN--YNHLIQMVTDG 528

  Fly   155 TVDLAA---AFIPSLSDQRSFVY-YSTTTL--------DEGEWIMVMQRPRESASGSGLLAPFEF 207
            ..|.|.   |.:||.|....|.. |::|.|        |...||              .|.||..
plant   529 VYDAAVGDIAIVPSRSKLVDFSQPYASTGLVVVIPANDDNATWI--------------FLRPFTS 579

  Fly   208 WVWILILVSLLAVGPIIYALIILRNRLTGDGQQTP-YSLGHCAWFVYGALMK--QGSTLSPIADS 269
            .:|.::|||.|.:..:|:   ||.:|:..|.:..| ..|.....|.:..|.|  |..|:|.:|  
plant   580 RLWCVVLVSFLVIAVVIW---ILEHRINEDFRGPPRRQLSTMLLFSFSTLFKRNQEDTISNLA-- 639

  Fly   270 TRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHFVSMRGGGVEYAIRTTN 334
             ||:...|...:.:||:.||||||:.||:.:.......: |.|..::..:..:.|  .:.:....
plant   640 -RLVMIVWLFLLMVLTASYTANLTSILTVQQLPSAITGI-DSLRASEVPIGYQAG--TFTLEYLT 700

  Fly   335 ESLSMLNRMIQNNYAVFSDETNDTYNLQNYVEKN-GYV--FVRDRPAINIMLYRDYLYRKTVSFS 396
            .||.|....:     |..|.|.:..........| |.|  .|.:.|.|.:     :|..:|    
plant   701 YSLGMARSRL-----VPLDSTEEYEKALKLGPTNWGGVAAIVDELPYIEL-----FLAERT---- 751

  Fly   397 DEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIVKHLSKRNLPSAEICPQDL 461
                  .|.:..|||:.:...||:...|.|:......:|.|.|:..::.:.|:.|     |..:.
plant   752 ------GFKIVGEPFMHRGWGFAFKRDSPLAIDMSTAILKLSETRKLQEIRKKWL-----CKTNC 805

  Fly   462 GGTE------RQLRNGDLMMTYYIMLAGFATALAVFSTELMFRYVNSRQ 504
            .|..      .||........|.:.:|...:|..||...::.::|..|:
plant   806 AGKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFLVFVLRMIRQFVRYRR 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 34/137 (25%)
Lig_chan 209..458 CDD:459656 62/254 (24%)
GLR5NP_565744.1 PBP1_GABAb_receptor_plant 32..416 CDD:380645 2/8 (25%)
GluR_Plant 458..800 CDD:270404 95/386 (25%)
Lig_chan 578..832 CDD:459656 67/287 (23%)

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