DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and GLR2.9

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001325277.1 Gene:GLR2.9 / 817458 AraportID:AT2G29100 Length:942 Species:Arabidopsis thaliana


Alignment Length:509 Identity:106/509 - (20%)
Similarity:198/509 - (38%) Gaps:90/509 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 W-IGGKHLRIAT-----LEDF-PLSYTEVLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNI 136
            | |.||.||:..     ..|| .::...:....|..|:.:  :|.:...|:..:   :|:|:...
plant   440 WEIPGKKLRVGVPMKKGFFDFVKVTINPITNKKTPTGYAI--EIFEAALKELPY---LVIPEYVS 499

  Fly   137 IGSPSDFDRSLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRESASGSGL 201
            ..||:::: :|:..|...|.|.....|...:::..:..::....:.|..:||..|..|:......
plant   500 FESPNNYN-NLVYQVYDKTWDAVVGDITITANRSLYADFTLPFTESGVSMMVPVRDNENKDTWVF 563

  Fly   202 LAPFEFWVWILILVSLLAVGPIIYALIILRNRLTGDGQQTP-YSLGHCAWFVYGALM--KQGSTL 263
            |.|:...:|:......:.:|.:::   :..:|:..|.:..| |.:|...||.:..::  .:.:.:
plant   564 LEPWSLELWVTTGCFFVFIGFVVW---LFEHRVNTDFRGPPQYQIGTSLWFSFSTMVFAHRENVV 625

  Fly   264 SPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHFVSMRGGGVEY 328
            |.:|   |.:...|...:.:||..|||:||:|||:.........|||:: ||:..|..:||....
plant   626 SNLA---RFVVVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTNVNDLI-KNRDCVGYQGGAFVK 686

  Fly   329 AIRTTNESLSMLNRMIQNNYAVFSDETNDTYNLQNYVEKNGYVFVRDRPAINIMLYRDYLYRKTV 393
            .|        :|......:.....|...|..:|.:..:..|.....|..|        || :..:
plant   687 DI--------LLGLGFHEDQLKPFDSAKDADDLLSKGKSKGIAAAFDEVA--------YL-KAIL 734

  Fly   394 SFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIVKHLSKRNLPSAEICP 458
            |.|..|    :.|.:..|......||:|..|.|:..|...:|:|.::.:.:.:..|..|....||
plant   735 SQSCSK----YVMVEPTFKTGGFGFAFPKNSPLTGEFSRAILNLTQNNVTQQIEDRWFPKKNDCP 795

  Fly   459 QDLGGTERQLRNGDLMMTYYI---MLAGFATALAVFSTELMFRYVNSRQEANKWARHGIGRTPNG 520
            ..:    ..|.:..|.::.::   ::||.|.:.::.....:|.|.:         ||.:|.....
plant   796 DPM----TALSSNRLNLSSFLGLFLIAGTAISFSLLVFVALFLYEH---------RHTLGDDSED 847

  Fly   521 QSVAPSRWLRGWRRL------------------NSGHGQLLGASTHGQNVTPPP 556
            ..         ||:|                  ||....:....||   .||.|
plant   848 SL---------WRKLKFLFKIFDEKDMNSHTFKNSAIHNISSPMTH---KTPSP 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 21/114 (18%)
Lig_chan 209..458 CDD:459656 56/251 (22%)
GLR2.9NP_001325277.1 PBP1_GABAb_receptor_plant 33..415 CDD:380645
GluR_Plant 445..788 CDD:270404 80/376 (21%)
Lig_chan 568..821 CDD:459656 62/284 (22%)
Blue background indicates that the domain is not in the aligned region.

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