DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and GLR2.3

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001325281.1 Gene:GLR2.3 / 817007 AraportID:AT2G24710 Length:919 Species:Arabidopsis thaliana


Alignment Length:546 Identity:110/546 - (20%)
Similarity:187/546 - (34%) Gaps:165/546 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NLIQMGE---------NGTLSPVTELPMDVDASEAGFDADAPVETLETINRKKPKLREMLDWIG- 81
            |:|..||         ||.:..:                |....::..::..|..|:.:: |.| 
plant   414 NIINTGEKSIGFWKEGNGLVKKL----------------DQQASSISALSTWKDHLKHIV-WPGE 461

  Fly    82 -------------GKHLRIATLEDFPLSYTEVLE-------NGT---------------RVGHGV 111
                         ||.|||...:  ...||::::       |.|               .:.:.|
plant   462 ADSVPKGWQIPTKGKKLRIGVPK--RTGYTDLVKVTRDPITNSTVVTGFCIDFFEAVIRELPYDV 524

  Fly   112 SFQIIDFLKK------KFN-FTYEVVVPQ-DNIIGSPSDFDRSLIEMVN-SSTVDLAAAFIPS-- 165
            |::.|.|.|.      .:| ..|:|.:.: |.::|     |.::  :|| ||.||....||.|  
plant   525 SYEFIPFEKPDGKTAGNYNDLVYQVYLGRYDAVVG-----DTTI--LVNRSSYVDFTFPFIKSGV 582

  Fly   166 -----LSD--QRSFVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFEFWVWILILVSLLAVGPI 223
                 ::|  :|.::.:                          :.|..:.:|:...:|...||..
plant   583 GLIVEMTDPVKRDYILF--------------------------MKPLSWKLWLTSFISFFLVGCT 621

  Fly   224 IYALIILRNRLTGDGQQTP-YSLGHCAWFVYGALMKQGSTLSP----IADSTRLLFATWWIFITI 283
            ::.|...||   .|....| :......||.:..::     .:|    .:...|.|...|:..:.:
plant   622 VWVLEYKRN---PDFSGPPRFQASTICWFAFSTMV-----FAPRERVFSFWARALVIAWYFLVLV 678

  Fly   284 LTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHFVSMRGGGVEYAIRTTNESLSMLNRMIQNNY 348
            ||..|||:|.:.||..|......:::.:|.|        |..|.|. ||:.....:..|....:.
plant   679 LTQSYTASLASLLTSQKLNPTITSMSSLLEK--------GETVGYQ-RTSFILGKLKERGFPQSS 734

  Fly   349 AVFSDETNDTYNLQNYVEKNGYV---FVRDRPAINIMLYRDYLYRKTVSFSDEKVHC-PFAMAKE 409
            .|..|...:...|.:...|.|.|   |: :.|.:.:.|.:               .| .:.|.:|
plant   735 LVPFDTAEECDELLSKGPKKGGVSGAFL-EIPYLRLFLGQ---------------FCNTYKMVEE 783

  Fly   410 PFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIVKHLSKRNLPSAE-ICPQDLGG-------TER 466
            ||......|.:||||.|.......:|.:.||.....|.:......| .||..:..       |.|
plant   784 PFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAMELERAWFKKKEQSCPDPITNPDPNPSFTSR 848

  Fly   467 QLRNGDLMMTYYIMLAGFATALAVFS 492
            ||.....:..:..:|.....||..|:
plant   849 QLDIDSFLFLFVGVLLVCVMALGNFT 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 84/402 (21%)
GLR2.3NP_001325281.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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