DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and grid1a

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_021323097.2 Gene:grid1a / 793756 ZFINID:ZDB-GENE-120411-28 Length:1044 Species:Danio rerio


Alignment Length:658 Identity:154/658 - (23%)
Similarity:241/658 - (36%) Gaps:147/658 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TNLIQMGENGTLSPVTELPMDVDASE---------AGFDADAPVETLETINRKKPKLREMLDWIG 81
            |.|:....||..|.|....:....||         |.:|:|..:......||....::       
Zfish   379 TGLMDFRSNGANSHVQFEILGTSYSETFGKDVKRLATWDSDRGLNGSLRENRADHGMQ------- 436

  Fly    82 GKHLRIATL--EDFPLSYTEVLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSP---S 141
            |..|::.||  |.|.:....:|....|. .|.|..::|.|.|...|.||:....|...|||   .
Zfish   437 GITLKVVTLLEEPFVMVAENILGQPKRY-KGFSIDVLDALAKILGFKYEMYQVADAKYGSPQANG 500

  Fly   142 DFDRSLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFE 206
            .::..:.|:: ....|:|.:.|....::.:.|.:|...||....|: |.:..|..:...|||||:
Zfish   501 SWNGMIGELI-GKRADVAISAITITPERENVVDFSKRYLDYSVGIL-MTKTEERLNIFSLLAPFD 563

  Fly   207 FWVWILILVSLLAVGPIIYALIILRNRLTGDGQQTP----------YSLGHCAWFVYGALMKQG- 260
            ..||..|..::    |::..::.|..|:.....|.|          .|.....|.||||.::|| 
Zfish   564 LAVWACIAAAI----PVVGVMVFLLRRVQSVRSQNPPGPHQPASVTTSFQSAIWIVYGAFVQQGG 624

  Fly   261 -STLSPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNK-HFVSMRG 323
             |.:|.:|  .|:...:||:|..|:.|.|||||.|:||:|:......|..|:..::: ::.::|.
Zfish   625 ESFMSSMA--LRIAMGSWWLFTLIVCSSYTANLAAYLTVSRMDNAIRTFQDLSKQSEINYGTVRE 687

  Fly   324 GGV-EY-AIRTTN-----ESLSMLNRMIQNNYAVFSDETNDTYNLQNYVEKNGYVFVRDRPAINI 381
            ..| || .::.||     .:.:.|.|.|..|....:..|:....::. |:::.|.|:.|      
Zfish   688 SAVFEYFRVKGTNPLEQDSTFAELWRTINKNQGQDNSVTSPAEGIRK-VKRDPYAFLWD------ 745

  Fly   382 MLYRDYLYRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIVKHL 446
            |...:|     .:.:|:  .|...:.......|....|...||....||..::|.|.|.|.:..|
Zfish   746 MAVLEY-----AALTDD--DCTLVVTGNGMSSKGYGLALQHGSPYRDLFSQKILDLQEKGDLDIL 803

  Fly   447 SKRNLPSAEIC-------PQDLGGTERQLRNGDLMMTYYIMLAGFATALAVFSTELMFRYVNSRQ 504
            .::..|....|       ||..|   |.||.......:.|:.||...|..|.:.|..:.....::
Zfish   804 KQKWWPRKGRCDLDKHAEPQTEG---RALRLHSFAGVFCILAAGLLLACLVAALESWWNGPRCQR 865

  Fly   505 EANKWARHGIG-----------------------------------------RTPNGQSVAPSRW 528
            ...|....|..                                         |..:|....|..|
Zfish   866 AQPKEDTKGCALEMASGSLAYNEIAPAAGCARDVWPERERDWEDTQAFYTGQRGESGAGSPPFEW 930

  Fly   529 LRGWRR------------LNSGHGQLLGA----------STHG--QNVTPPPPYQSIFNGGSHGD 569
            ..|.|.            |..||||...|          |..|  :::.||        |||.|.
Zfish   931 ADGGRSGTQAAARSASGDLCPGHGQHAAAAELPGGPERFSPWGPVRDLVPP--------GGSWGR 987

  Fly   570 PLNRWRRP 577
            |..|...|
Zfish   988 PRARTEPP 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 29/113 (26%)
Lig_chan 209..458 CDD:459656 68/275 (25%)
grid1aXP_021323097.2 None

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