DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and grik5-like.1

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001072565.1 Gene:grik5-like.1 / 780020 XenbaseID:XB-GENE-5860197 Length:479 Species:Xenopus tropicalis


Alignment Length:510 Identity:108/510 - (21%)
Similarity:192/510 - (37%) Gaps:119/510 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 MDVDASEAGFDADAPVETLETINRKKPK-LREMLDWIGGKHLRIATLEDFPLSYTEVLENGTRVG 108
            :.|..::||       |:..:|:::|.: .|:.|     |||.:.|:.:.|.|..  .|:|.   
 Frog    14 LSVGCTDAG-------ESKGSIHKEKERSKRQAL-----KHLTVTTIMEQPFSMK--TESGM--- 61

  Fly   109 HGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSPSDFD---RSLIEMVNSSTVDLAAAFIPSLSDQR 170
            .|....::..|.:...|.|.:...:|...|: .|.|   ..::..|.....|||.|.:.....:.
 Frog    62 EGFCIDLLSELAQSLGFNYTIKEVKDGRYGA-KDQDGNWNGMVGEVLRKEADLAVAPLTITGARE 125

  Fly   171 SFVYYSTTTLDEGEWIMVMQRPRESASGS---GLLAPFEFWVWILILVSLLAVGPIIYALIILRN 232
            ..:.::...:..|  |.::.|..:.:..|   |.|.||....||.|||:.:.....::    |..
 Frog   126 RELAFTKPFMQTG--ISILLRKDDVSENSYLFGFLTPFSKETWIGILVAYVVTSLCLF----LVG 184

  Fly   233 RLTG------DGQQTPYSLGHCAWFVYGALMKQGSTLSPIADSTRLLFATWWIFITILTSFYTAN 291
            ||:.      ..:|..::..:..||..||...||:...|.:.|.|::...||||..:|.:.|.|:
 Frog   185 RLSPCEWTELSTEQNNFNFLNSLWFGVGAFTLQGAEPHPKSVSARIIAVIWWIFSIVLVAAYIAS 249

  Fly   292 LTAFLTL-SKFTLPYNTVNDILTKNKHFVSMRGGGVEYAIRTTNESLSMLNRMIQNNYAVFSDET 355
            ..|||.. |..|....|..|::.:..         :|:.  |.|.|         :.:..|.:..
 Frog   250 FAAFLNSDSMQTTNIQTFEDLVNQRT---------LEFG--TINSS---------STFQFFKNSK 294

  Fly   356 NDTYN-LQNYVEK-------------------NGYVFVRDRPAINIMLYRDYLYRKTVSFSDEKV 400
            |.||. :..|::|                   :.|.|:.:....:||:.:               
 Frog   295 NPTYRMIYEYMDKRKDELLVKSFAEGVRRVKESNYAFLGESVMQDIMVAK--------------- 344

  Fly   401 HCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIVKHLSKR------NLPSA----E 455
            ||....|.:....:....|..:.|.|.:.....:|...|||.:::|.|:      |:..:    .
 Frog   345 HCDLVRAPQIIAGRGYGIAASLDSPLIKPLSVAILEQTESGNIEYLRKKWWDNTCNMKRSAGWNP 409

  Fly   456 ICPQDLGGTERQLRNGDLMMTYYIMLAGFATALAVFS--TELMFRYVNSRQEANK 508
            :.|..|||              ..::.|...||.|.:  .||:.:..|:..:..|
 Frog   410 VQPHTLGG--------------IFLILGIGLALGVIAALVELVLKARNNADQQKK 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 82/386 (21%)
grik5-like.1NP_001072565.1 PBP2_iGluR_non_NMDA_like 41..396 CDD:270403 87/401 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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