DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and si:ch211-251b21.1

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001138274.1 Gene:si:ch211-251b21.1 / 571720 ZFINID:ZDB-GENE-060809-5 Length:458 Species:Danio rerio


Alignment Length:454 Identity:101/454 - (22%)
Similarity:181/454 - (39%) Gaps:77/454 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 GGKHLRIATLEDFPLSYTEVLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSPSDFD- 144
            |.:.|::.|:::.|.:    :..|:.: .|....::..:..|..|.|:|.:.:|...|...|.. 
Zfish    21 GPQPLKVTTIKEEPYA----MSKGSEL-EGFCIDMLSAISNKLGFKYDVHLVKDGRYGKTDDSGN 80

  Fly   145 -RSLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEG-EWIMVMQRPRESASGSGLLAPFEF 207
             ..:|..|.....|:|.|.:...:.:.:.|..|...:..| .:||......:.:....||..|..
Zfish    81 WNGMIGEVVRGEADIAVAPLTLTAQREAVVDMSKPFMQTGLSFIMRKDLGSDDSQFLSLLKLFST 145

  Fly   208 WVWILILVSLLAVGPIIYALIILRNRLTGDGQQTP------YSLGHCAWFVYGALMKQGSTLSPI 266
            .:|:.:||:.|.....|:    |.:|::....:.|      ::|.|..|:..|||..||:...|.
Zfish   146 EMWMGVLVAYLLTSICIF----LVSRISPCEWEQPEKDNNSFTLSHSFWYTVGALTLQGAGPHPK 206

  Fly   267 ADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHFVSMRGGGVEYAIR 331
            |.|.|::.:.||||..:|.:.|.|||:.:|......|...|..|:..:|.         :||.  
Zfish   207 ALSGRVITSIWWIFSLVLLACYFANLSLWLHSDNQQLSIKTFEDLANQNV---------IEYG-- 260

  Fly   332 TTNESLSMLNRMIQNNYAVFSDETNDTYN--------LQNY----------VEKNGYVFVRDRPA 378
            |..:|         :::..|.:..|.||:        .|:|          .:|..|.|:.:..:
Zfish   261 TIKDS---------SSFNFFKNSNNPTYHRIYEHIKEAQSYSLNAAEGFRRAQKGNYAFIGESVS 316

  Fly   379 INIMLYRDYLYRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIV 443
            :::.:.|               :|....|.|....:..:.|.|:||.|.:.....:|.|.|||.:
Zfish   317 LDLAVAR---------------YCNLTRAPEIIGMRGYSIAAPLGSPLIKNLSVAILRLSESGEL 366

  Fly   444 KHLSKRNLPSAEICPQDLGGTERQLRNGDLMMTYYIMLAGFATALAVFSTELMFRYVNSRQEAN 507
            .:...:...|:.:.....|.   .|:...|...:  :|..|...|.:| ..||.....||:.||
Zfish   367 DYFRSKWWASSCVAKDSKGA---PLKPASLKGVF--LLLAFGLGLGIF-LALMELAAKSRKVAN 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 82/380 (22%)
si:ch211-251b21.1NP_001138274.1 PBP2_iGluR_non_NMDA_like 25..375 CDD:270403 86/393 (22%)
Lig_chan 146..396 CDD:278489 65/291 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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