DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and grik1b

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_690040.5 Gene:grik1b / 561540 ZFINID:ZDB-GENE-070821-1 Length:906 Species:Danio rerio


Alignment Length:481 Identity:106/481 - (22%)
Similarity:184/481 - (38%) Gaps:92/481 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LETINRKKPKLREMLDWIGGKHLRIATL----------EDFPLSYTEVLENGTRVGHGVSFQIID 117
            |...:..|.|...:.|.:..:.|.:.|:          .|.||...:..|.          ..:|
Zfish   452 LNLTDSNKDKNTNVTDSMANRTLIVTTILENPYVMYKKSDKPLYGNDRFEG----------YCLD 506

  Fly   118 FLKKKFN---FTYEVVVPQDNIIGSPSD------FDRSLIEMVNSSTVDLAAAFIPSLSDQRSFV 173
            .||:..|   |:|||.:..|...|:.:|      ..|.||:.|    .|||.|.:       :..
Zfish   507 LLKELSNILGFSYEVKLVTDGKYGAQNDKGEWNGMVRELIDHV----ADLAVAPL-------TIT 560

  Fly   174 YYSTTTLDEGEWIMVM------QRPRESASG-SGLLAPFEFWVWILILVSLLAVGPIIYALIILR 231
            |.....:|..:..|.:      .:|..:..| ...|.|....:|:.:|::.|.|..:::.:.   
Zfish   561 YVREKVIDFSKPFMTLGISILYHKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIA--- 622

  Fly   232 NRLT-------------GDGQQTPYSLGHCAWFVYGALMKQGSTLSPIADSTRLLFATWWIFITI 283
             |.|             .|..:..::|.:..||..||||:|||.|.|.|.|||::...||.|..|
Zfish   623 -RFTPYEWYNPHPCNPDSDVVENNFTLINSVWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLI 686

  Fly   284 LTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHFVSMRGGGVEYAIRTTNESLSMLNRMIQNNY 348
            :.|.|||||.||||:.:...|.::.:|:..:.|         :||.......:::...:...:.|
Zfish   687 IISSYTANLAAFLTVERMDSPIDSADDLAKQTK---------IEYGAVRDGSTMTFFKKSKISTY 742

  Fly   349 A---VFSDETNDTYNLQNYVEKNGYVFVRDRPAINIMLYRDY---LYRKTVSFSDEKVHCPFAMA 407
            .   .|.....:|..::|           :|..|..:|..||   :...::.:..:: :|.....
Zfish   743 EKMWAFMSSRKNTALVKN-----------NREGIQRVLTTDYALLMESTSIEYISQR-NCNLTQI 795

  Fly   408 KEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIVKHLSKRNLPSAEICPQDLGGTERQLRNGD 472
            ......|......||||.........:|.|.|.|.: |:.|........||::.......|...:
Zfish   796 GGLIDSKGYGVGTPIGSPYRDKVTIAILQLQEEGKL-HMMKEKWWRGNGCPEEDSKEASALGVEN 859

  Fly   473 LMMTYYIMLAGFATALAVFSTELMFR 498
            :...:.::.||...::.|...|.:::
Zfish   860 IGGIFIVLAAGLVLSVFVAIGEFIYK 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 90/398 (23%)
grik1bXP_690040.5 Periplasmic_Binding_Protein_Type_1 62..455 CDD:299141 1/2 (50%)
ANF_receptor 80..423 CDD:279440
Periplasmic_Binding_Protein_Type_2 471..840 CDD:304360 95/415 (23%)
Lig_chan 602..871 CDD:278489 67/294 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591361
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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