DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and grin2da

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_073787594.1 Gene:grin2da / 449864 ZFINID:ZDB-GENE-041008-124 Length:1918 Species:Danio rerio


Alignment Length:689 Identity:144/689 - (20%)
Similarity:243/689 - (35%) Gaps:230/689 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 NRKKPKLREMLDWIGGKHLRIATLEDFPLSYTEVLENGT-------------------RVGHGVS 112
            :|..|.|:.:.|   .:|||:.|||:.|....|..:.||                   .|..|:.
Zfish   440 SRYGPFLKPLDD---SQHLRVVTLEERPFVIVEPADPGTGSCIRDSVPCRLPLNNRSSMVVEGIQ 501

  Fly   113 FQ-------IIDFLK---KKFNFTYEVVVPQDNIIGSPSDFD-RSLIEMVNSSTVDLAAAFIPSL 166
            ..       .||.||   |...|||::.:..:...|...|.. ..::..|.|...|:|...: ::
Zfish   502 SMKHCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDGQWNGMVGEVVSKRADMAIGSL-TI 565

  Fly   167 SDQRS-FVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFEFWVWILILVSLLAV---------- 220
            :::|| .|.:|...::.|..:|| .|...:.|.|..|.|:...||:::.|..|:|          
Zfish   566 NEERSEVVEFSVPFVETGISVMV-SRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEF 629

  Fly   221 -GPIIYALIILRNRLTGDGQQTPYSLGHCAWFVYGALMKQGSTL-SPIADSTRLLFATWWIFITI 283
             .|:.|...:...:..|..:   :::|...|.::..:......: :|...:::::...|..|..|
Zfish   630 FSPVGYNRSLQSGKTAGGSK---FTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVI 691

  Fly   284 LTSFYTANLTAFLTLSKFTLPYNTVNDILTKN-KH---------FVSMRGGGVEYAIRTTNESLS 338
            ..:.|||||.||:...::   .:||:.:..|. :|         |.::..|..|..||:...  :
Zfish   692 FLASYTANLAAFMIQEEY---IDTVSGLSDKKFQHPTEQYPPLRFGTVPNGSTEENIRSNYP--N 751

  Fly   339 MLNRMIQNNYAVFSDETNDTYNLQNYVEKNGYV--FVRDRPAINIMLYRDYLYRKTVSFSDEKVH 401
            |...|::||.....|.      ::|.  |.|.:  |:.|...:|.|..:|. ..|.::....||.
Zfish   752 MHQYMVRNNQRGVEDA------IENL--KTGKLDAFIYDAAVLNYMARKDE-GCKVMTIGSGKVF 807

  Fly   402 CP--FAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVE----SGIVKHLSKRNLPSAEICPQD 460
            ..  :.:|    |.|...:..|:...|.||...:.:.::|    |||. |..|..:.|:::...:
Zfish   808 ATTGYGVA----LHKNSRWKRPLDLALLQLVGDDEIDMLERLWLSGIC-HNDKIEVMSSKLDIDN 867

  Fly   461 LGGTERQLRNGDLMMTYYIMLAGFATALAVFSTE-LMFRYVNSRQEANKW-ARHGIGRT------ 517
            :.|            .:|::|.....:|.||:.| |::           | .||.:|||      
Zfish   868 MAG------------VFYMLLVAMGLSLLVFAWEHLVY-----------WKLRHCLGRTRGLDFL 909

  Fly   518 ------------------PNG-QSVAPSRWLRGWRRLNSGHGQLLGASTHGQNVTPPPP------ 557
                              |.| ||..|..           |        |...|.||||      
Zfish   910 LAFSRGMYSCCNFEDETAPGGSQSTLPQY-----------H--------HVSTVPPPPPPHVIST 955

  Fly   558 ---------------------------YQSIFNG----GSH-------------GDPL------- 571
                                       |.::..|    |.|             |.|:       
Zfish   956 AVANPPIAMAQQLPQQQQKQHHQQPPVYSALLPGSPPSGGHSAMALGPSNSPILGAPMPCSTFLP 1020

  Fly   572 ---------NRWRRPLANGNALGNGVLLGGDSEGGVRRL 601
                     :||.||.. |:...:||      .||:..|
Zfish  1021 RHDRRLAVVDRWTRPKV-GSEKPSGV------SGGITDL 1052

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 33/139 (24%)
Lig_chan 209..458 CDD:459656 60/278 (22%)
grin2daXP_073787594.1 None

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