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Protein Alignment Ir76b and grin2da

DIOPT Version :9

Sequence 1:	NP_649176.1	Gene:	Ir76b / 40198	FlyBaseID:	FBgn0036937	Length:	636	Species:	Drosophila melanogaster
Sequence 2:	XP_009292354.1	Gene:	grin2da / 449864	ZFINID:	ZDB-GENE-041008-124	Length:	1916	Species:	Danio rerio

Alignment Length:	687	Identity:	144/687 - (20%)
Similarity:	243/687 - (35%)	Gaps:	228/687 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    67 NRKKPKLREMLDWIGGKHLRIATLEDFPLSYTEVLENGT-----------------RVGHGVSFQ 114
            :|..|.|:.:.|   .:|||:.|||:.|....|..:.||                 .|..|:...
Zfish   440 SRYGPFLKPLDD---SQHLRVVTLEERPFVIVEPADPGTGSCIRDSVPCRLPLNNSMVVEGIQSM 501

  Fly   115 -------IIDFLK---KKFNFTYEVVVPQDNIIGSPSDFD-RSLIEMVNSSTVDLAAAFIPSLSD 168
                   .||.||   |...|||::.:..:...|...|.. ..::..|.|...|:|...: ::::
Zfish   502 KHCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDGQWNGMVGEVVSKRADMAIGSL-TINE 565

  Fly   169 QRS-FVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFEFWVWILILVSLLAV-----------G 221
            :|| .|.:|...::.|..:|| .|...:.|.|..|.|:...||:::.|..|:|           .
Zfish   566 ERSEVVEFSVPFVETGISVMV-SRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEFFS 629

  Fly   222 PIIYALIILRNRLTGDGQQTPYSLGHCAWFVYGALMKQGSTL-SPIADSTRLLFATWWIFITILT 285
            |:.|...:...:..|..:   :::|...|.::..:......: :|...:::::...|..|..|..
Zfish   630 PVGYNRSLQSGKTAGGSK---FTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFL 691

  Fly   286 SFYTANLTAFLTLSKFTLPYNTVNDILTKN-KH---------FVSMRGGGVEYAIRTTNESLSML 340
            :.|||||.||:...::   .:||:.:..|. :|         |.::..|..|..||:...  :|.
Zfish   692 ASYTANLAAFMIQEEY---IDTVSGLSDKKFQHPTEQYPPLRFGTVPNGSTEENIRSNYP--NMH 751

  Fly   341 NRMIQNNYAVFSDETNDTYNLQNYVEKNGYV--FVRDRPAINIMLYRDYLYRKTVSFSDEKVHCP 403
            ..|::||.....|.      ::|.  |.|.:  |:.|...:|.|..:|. ..|.::....||...
Zfish   752 QYMVRNNQRGVEDA------IENL--KTGKLDAFIYDAAVLNYMARKDE-GCKVMTIGSGKVFAT 807

  Fly   404 --FAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVE----SGIVKHLSKRNLPSAEICPQDLG 462
              :.:|    |.|...:..|:...|.||...:.:.::|    |||. |..|..:.|:::...::.
Zfish   808 TGYGVA----LHKNSRWKRPLDLALLQLVGDDEIDMLERLWLSGIC-HNDKIEVMSSKLDIDNMA 867

  Fly   463 GTERQLRNGDLMMTYYIMLAGFATALAVFSTE-LMFRYVNSRQEANKW-ARHGIGRT-------- 517
            |            .:|::|.....:|.||:.| |::           | .||.:|||
Zfish   868 G------------VFYMLLVAMGLSLLVFAWEHLVY-----------WKLRHCLGRTRGLDFLLA 909

  Fly   518 ----------------PNG-QSVAPSRWLRGWRRLNSGHGQLLGASTHGQNVTPPPP-------- 557
                            |.| ||..|..           |        |...|.||||
Zfish   910 FSRGMYSCCNFEDETAPGGSQSTLPQY-----------H--------HVSTVPPPPPPHVISTAV 955

  Fly   558 -------------------------YQSIFNG----GSH-------------GDPL--------- 571
                                     |.::..|    |.|             |.|:
Zfish   956 ANPPIAMAQQLPQQQQKQHHQQPPVYSALLPGSPPSGGHSAMALGPSNSPILGAPMPCSTFLPRH 1020

  Fly   572 -------NRWRRPLANGNALGNGVLLGGDSEGGVRRL 601
                   :||.||.. |:...:||      .||:..|
Zfish  1021 DRRLAVVDRWTRPKV-GSEKPSGV------SGGITDL 1050

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.