DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and grid2

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:686 Identity:156/686 - (22%)
Similarity:265/686 - (38%) Gaps:145/686 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TNLIQMGENGTLSPVTELPMDVDASEAGFDADAPVETLET---INRKKPKL--REMLDWIGGKHL 85
            |:|::..:||: :|  .:..::..:..|.|....|..|.|   |:.....|  |::.:.:.|..|
Zfish   382 TSLLEFNDNGS-NP--NIHFEILGTNYGEDRGRGVSRLATWDPIHGLNGTLTDRKLENNMRGVVL 443

  Fly    86 RIATLEDFPLSYTEVLEN---GTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSPSDFD--- 144
            |:.|:.:.|  :..|.||   ..:...|.|..::|.|.....|.||:.|..|:..|| ...|   
Zfish   444 RVVTVLEEP--FVMVSENVLGKPKKYQGFSIDVLDALANYLGFKYEIYVAPDHKYGS-QQADGTW 505

  Fly   145 RSLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFEFWV 209
            ..||..:.....|:..:.:....::.|.|.::|..:|....:: :::...:......||||:..:
Zfish   506 NGLIGELVFKRADVGLSALTITPERESVVDFTTRYMDYSVGVL-LRKAERTVDMFACLAPFDLSL 569

  Fly   210 WILILVSLLAVGPIIYALIILRNRLTGDGQQTPYSLGHCAWFVYGALMKQGSTLSPIADSTRLLF 274
            |..|..::|.||.::|.|..|.......|..:..:|.:..|||||:.::||..:.....:||::.
Zfish   570 WACIAGTVLLVGTLVYLLNWLNPPRLPMGSVSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMM 634

  Fly   275 ATWWIFITILTSFYTANLTAFLTLSKF--------------TLPYNTVNDILTKNKHFVSMRGGG 325
            ..||:|..|:.|.|||||.||||:|:.              .|||.||.|    :..:..:|..|
Zfish   635 GVWWLFALIVISSYTANLAAFLTISRIENSIQSLQDLAKQTDLPYGTVLD----SAVYDQVRSKG 695

  Fly   326 VEYAIRTTNESLSMLNRMIQNNYAVFSDETNDTYNLQNYVE--KNG--------YVFVRDRPAIN 380
            :....|  :...|.:.|||           |.|...:|.||  |.|        :.||.|...:.
Zfish   696 MNPFER--DPMYSQMWRMI-----------NRTGGAENNVEESKEGIRKVKYGRFAFVWDAAVLE 747

  Fly   381 IMLYRD---YLYRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGI 442
            .:...|   .||..:.:.:|.    .:.||.:.            ||....:|...:|.|.::|.
Zfish   748 YVAINDEDCSLYTVSNNVADR----GYGMAMQH------------GSPYRDIFSQRILELQQNGD 796

  Fly   443 VKHLSKRNLPSAEICPQDLGGTERQLRNGDLM------MTYYIMLAGFATALAVFSTELMFRYVN 501
            :..|..:..|....|  ||.......::|..:      ..::::.||...:..:.:.|..     
Zfish   797 MDILKLKWWPRDSPC--DLYSPVGTRKSGSALDIHSFAGVFFVLAAGVVLSCLIATVETW----- 854

  Fly   502 SRQEANKWARHGIGRTPNGQSVAPSRWLRGWRRLN-------SGHGQLLGASTHGQNVTP----- 554
                   |.|....|.|:.:............|:|       |.|.|.   ||...::||     
Zfish   855 -------WTRRKGSRVPSKEDDKEIDLEHLHHRVNSLCTEDESPHKQF---STSSIDLTPLDMDS 909

  Fly   555 -PPPYQSI-----FNGGSH-------GDPLNRWRRPLANGNALG--NGVLLGGDSEGGVRRLING 604
             |...|::     |. .:|       .:.:....|.|:...|.|  .|.:....:.|..|:    
Zfish   910 LPAARQALEQISDFR-NTHITTTTFIPEQIQTLSRSLSAKAAAGFAFGAVQDHRTGGPFRQ---- 969

  Fly   605 RDYMVFRNPNGQSQLVPVRSPSAALFQ------YSY 634
                  |.|||.....||::.|:..:|      :||
Zfish   970 ------RAPNGGFFRSPVKTMSSIPYQPTPAPNFSY 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 26/114 (23%)
Lig_chan 209..458 CDD:459656 71/275 (26%)
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..429 CDD:380614 11/49 (22%)
PBP2_iGluR_delta_2 440..806 CDD:270449 101/402 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009 3/11 (27%)

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