DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and GluRIB

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster


Alignment Length:695 Identity:134/695 - (19%)
Similarity:242/695 - (34%) Gaps:213/695 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NLIQMGENGTLSPVTELPMDVDASEAGFDADAPVETLETINRKKPKLREMLDWIGGKHLRIATLE 91
            ::::|..|..:..|.|...|     ||         |:.:|.|..:||..:::...:...:.|:.
  Fly   456 HVVEMTVNSAMVKVAEWNDD-----AG---------LQPLNAKYVRLRPHVEFEKNRTYIVTTVL 506

  Fly    92 DFP------LSYTEVLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSPSD-----FDR 145
            :.|      :::.|.|....|. .|....:.|.|.|:....||:.:.:|...||...     :|.
  Fly   507 EEPYIMLKQVAFGEKLHGNNRF-EGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDG 570

  Fly   146 SLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFEFWVW 210
            .:.|:|... .|:|.|.:...:::...:.:|...:..|..||:.:..:::......:.|....:|
  Fly   571 MVGELVRKE-ADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFSFMNPLSQEIW 634

  Fly   211 ILILVSLLAVGPIIYAL---------II------------------LRNR----LTG-------D 237
            :.::.|.:.|..:::.:         ::                  |.|:    :.|       .
  Fly   635 VSVIFSYIGVSIVLFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPP 699

  Fly   238 GQQTP--------------------------------YSLGHCAWFVYGALMKQGSTLSPIADST 270
            |..||                                :|:.:..||...|.|:||..|||.:.|.
  Fly   700 GPPTPGAQTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLSPRSVSG 764

  Fly   271 RLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDIL--TKNKHFVSMRGGGVEYAIRTT 333
            |:..|:|:.|..||.|.|||||.||||:.:...|.|:..|:.  |:.::...:.|...::..|: 
  Fly   765 RIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQYGTLLHGSTWDFFRRS- 828

  Fly   334 NESLSMLNRMIQNNYAVFSDETNDTYNLQNYVEKNGYVFVRDRPAINIMLYRDYLYRKTVSFSDE 398
              .:.:.|:|.:                  |:....:|||   |..:..:.|....:...:...|
  Fly   829 --QIGLHNKMWE------------------YMNSRKHVFV---PTYDEGIKRVRNSKGKYALLVE 870

  Fly   399 KVHCPFAMAKEP--FLKKKRT-------FAYPIGSNLSQLFDPELLHLVESG-IVKHLSKRNLPS 453
            .....:..|:||  .:|..|.       .|.|:||.|....:..:|.|.|:| ::|..:|.....
  Fly   871 SPKNEYVNAREPCDTMKVGRNLDTKGFGIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEK 935

  Fly   454 AEICPQDLGGTER-QLRNGDLMMTYYIMLAGFATALAVFSTELMFRYVNSRQEANKWARHGIGRT 517
            ||......|.|.. :|...::...:||::.|...::.|...|..||                   
  Fly   936 AECSTHKDGETSHSELSLSNVAGIFYILIGGLLVSVFVAILEYCFR------------------- 981

  Fly   518 PNGQSVAPSRWLRGWRRLNSGHGQLLGASTHGQNVTPPPPYQSIFNGGSHGDPLNRWRRPLANGN 582
                                                                  :|..|..::|:
  Fly   982 ------------------------------------------------------SRDSRSASSGS 992

  Fly   583 ALGNGVLLGGDSEGGVRRLINGRDYMVFRNPNGQSQLVPVRSPSA 627
            .:|.|:.|||...||.....||...:      |.|..||...||:
  Fly   993 GMGLGMGLGGGMSGGSLGKANGSMML------GPSSAVPGGMPSS 1031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 87/445 (20%)
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375 7/35 (20%)
ANF_receptor 55..461 CDD:279440 0/4 (0%)
PBP2_iGluR_AMPA 497..938 CDD:270433 93/466 (20%)
Lig_chan 632..967 CDD:278489 74/358 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462530
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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