DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and Ir40a

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:526 Identity:96/526 - (18%)
Similarity:163/526 - (30%) Gaps:188/526 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PLNDSPPTNLIQMGENGTLSPVTELPMDVDASEAGFDADAPVETLETINRKKPKLREMLDWIGGK 83
            |:..|||...:....|                  .|:.|....:|::|.::|.::      .||:
  Fly   221 PVFHSPPWFWVTYCNN------------------SFEEDEEFNSLDSIEKRKVRV------TGGR 261

  Fly    84 HLRIATLEDFPLSYTEVLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGS--------P 140
            ..|:..|                            |.|..||.::.:.......||        .
  Fly   262 DHRLLML----------------------------LSKHMNFRFKYIEAPGRTQGSMRSEDGKDS 298

  Fly   141 SDFDRSLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTL-DEGEWIMVMQRPRESASGSGLLAP 204
            :|.....|.::.|...|.....:....::|..:.:|..|| |.|.:  ....||.......::.|
  Fly   299 NDSFTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLADSGAF--ATHAPRRLNEALAIMRP 361

  Fly   205 FEFWVWILILVSLLAVGPIIYALII------------------------------------LRNR 233
            |:..:|..::::::..|||.|.:|.                                    |:.|
  Fly   362 FKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPR 426

  Fly   234 LTGDGQQTPYSL-GHCAWFVYGALMKQGSTLSPIADSTRLLFAT--WWIFIT-ILTSFYTANLTA 294
            ......|.|:.| ..|.||.....:||  :.:.:.:..|..|.|  :||..| :|...|:|.||:
  Fly   427 TVLSAHQMPHQLFQKCIWFTLRLFLKQ--SCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTS 489

  Fly   295 FLTLSKFTLPYNTVNDILTKNKHFVSMRGGGVEYAIRTTNESLSML---NRMIQNNYAVFSDET- 355
            .........|.||:..:.....|      .|....:...:.||.||   ..:.:..||:...:. 
  Fly   490 QFARPAREPPINTLQRLQAAMIH------DGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVI 548

  Fly   356 NDT--------------------------------YNLQNYVEKNGYVFVRDRPAINIMLYRDYL 388
            ||.                                :|:|.|...|.        .::..||..| 
  Fly   549 NDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNF--------QLSQKLYTRY- 604

  Fly   389 YRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIVKHLSKRNLPS 453
                 |....::.|||                 :||     .:..|:.|.||||:..::     :
  Fly   605 -----SAVAVQIGCPF-----------------LGS-----LNNVLMQLFESGILDKMT-----A 637

  Fly   454 AEICPQ 459
            ||...|
  Fly   638 AEYAKQ 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 76/438 (17%)
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 26/168 (15%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 20/95 (21%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 32/187 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462892
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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